RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 SLC35G4P0C7Q5 338 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 PGM1P36871 562 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 CTSKP43235 329 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 FOXA1P55317 472 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 PPP2CBP62714 309 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 PPP2CAP67775 309 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 FOXM1Q08050 763 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 RPS6KA2Q15349 733 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 ZNF423Q2M1K9 1284 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 PAGE2BQ5JRK9 111 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 PRMT9Q6P2P2 845 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 IL27RAQ6UWB1 636 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 UNQ6494/PRO21346Q6UXR6 183 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 RPS27LQ71UM5 84 aaKnown RBP12.78□□□□□ -0.36
SLIRP-201ENST00000238688 GLRX5Q86SX6 157 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 TBC1D21Q8IYX1 336 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 PGAM4Q8N0Y7 254 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 SNX31Q8N9S9 440 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 OR5K2Q8NHB8 316 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 SLC6A18Q96N87 628 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 CATSPER2Q96P56 530 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 EFCAB11Q9BUY7 163 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 SGPP1Q9BX95 441 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 CADM1Q9BY67 442 aaKnown RBP12.78□□□□□ -0.36
SLIRP-201ENST00000238688 TRIT1Q9H3H1 467 aaKnown RBP12.78□□□□□ -0.36
SLIRP-201ENST00000238688 ELOVL6Q9H5J4 265 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 MVB12BQ9H7P6 319 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 NMRK1Q9NWW6 199 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 TOR4AQ9NXH8 423 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 ADGRE2Q9UHX3 823 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 EIF3LQ9Y262 564 aaKnown RBP12.78□□□□□ -0.36
SLIRP-201ENST00000238688 NEUROG3Q9Y4Z2 214 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 ASB1Q9Y576 335 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 PCDHGB2Q9Y5G2 931 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 PCDHGA11Q9Y5H2 935 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 CFAP47Q6ZTR5 3102 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 WDFY3Q8IZQ1 3526 aa12.78□□□□□ -0.36
SLIRP-201ENST00000238688 APC2O95996 2303 aa12.77□□□□□ -0.36
SLIRP-201ENST00000238688 PKD1L2Q7Z442 2459 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 PRR19A6NJB7 356 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 H0Y8X5 98 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 MANBAO00462 879 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 PPP6CO00743 305 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 DKK1O94907 266 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 CAPNS1P04632 268 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 LINC00032P0C843 101 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 TSPAN8P19075 237 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 IDSP22304 550 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 IMPA1P29218 277 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 PRDX3P30048 256 aaKnown RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 IGFALSP35858 605 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 GNPDA1P46926 289 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 PREPP48147 710 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 PFN3P60673 137 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 RACK1P63244 317 aaKnown RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 ABRQ12979 859 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 ART3Q13508 389 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 FGL2Q14314 439 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 NFATC4Q14934 902 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 SHBQ15464 509 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 C6orf136Q5SQH8 315 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 ZNF648Q5T619 568 aaPredicted RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 CAPRIN2Q6IMN6 1127 aaKnown RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 GRHL2Q6ISB3 625 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 CRTC3Q6UUV7 619 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 NET1Q7Z628 596 aaPredicted RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 TRIM74Q86UV6 250 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 THOC6Q86W42 341 aaKnown RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 SNX32Q86XE0 403 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 DCP2Q8IU60 420 aaKnown RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 SCUBE1Q8IWY4 988 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 KIF2BQ8N4N8 673 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 KDF1Q8NAX2 398 aaPredicted RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 DNAJB8Q8NHS0 232 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 HMGCLL1Q8TB92 370 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 ADAMTS14Q8WXS8 1223 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 STARD8Q92502 1023 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 JADE3Q92613 823 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 TFGQ92734 400 aaPredicted RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 C3orf30Q96M34 536 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 WDR92Q96MX6 357 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 CCDC177Q9NQR7 707 aaPredicted RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 ACSS2Q9NR19 701 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 MBNL1Q9NR56 388 aaKnown RBP12.77□□□□□ -0.37
SLIRP-201ENST00000238688 PRDM4Q9UKN5 801 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 MSRB2Q9Y3D2 182 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 GPR45Q9Y5Y3 372 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 ZZEF1O43149 2961 aa12.77□□□□□ -0.37
SLIRP-201ENST00000238688 COL5A1P20908 1838 aaPredicted RBP12.76□□□□□ -0.37
SLIRP-201ENST00000238688 KCNE1BA0A087WTH5 132 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 PRAMEF26H0Y7S4 382 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 LSM1O15116 133 aaKnown RBP12.76□□□□□ -0.37
SLIRP-201ENST00000238688 VILLO15195 856 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 PRMT3O60678 531 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 SLC16A8O95907 504 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 CEACAM5P06731 702 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 FTH1P19P0C7X4 201 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 PRPS2P11908 318 aa12.76□□□□□ -0.37
SLIRP-201ENST00000238688 GPX3P22352 226 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms