RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 CIR1Q86X95 450 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 NXPE1Q8N323 547 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 OR52E4Q8NGH9 312 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 SLC5A11Q8WWX8 675 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 NDRG1Q92597 394 aaKnown RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 RAB7BQ96AH8 199 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 LRRC58Q96CX6 371 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 AURKBQ96GD4 344 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 FRG2BQ96QU4 278 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 TM9SF3Q9HD45 589 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 IFT52Q9Y366 437 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 A0A0G2JPF8 293 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 IQCMA0A1B0GVH7 501 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 MYBPHLA2RUH7 354 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 HNRNPCL3B7ZW38 293 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 L7N2F9 121 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 NRP1O14786 923 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 DFNA5O60443 496 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 CPNE3O75131 537 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 HNRNPCL4P0DMR1 293 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 MTHFD1P11586 935 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 GADD45AP24522 165 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 SLC6A6P31641 620 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 VAMP2P63027 116 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 SEC23BQ15437 767 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 CA9Q16790 459 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 TIGD5Q53EQ6 642 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 GOLGA7Q7Z5G4 137 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 SAPCD2Q86UD0 394 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 PROKR2Q8NFJ6 384 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 SGCDQ92629 289 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 AKAP1Q92667 903 aaKnown RBP eCLIP7.03□□□□□ -1.28
CPS1-201ENST00000233072 LRIG1Q96JA1 1093 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 ZC3H10Q96K80 434 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 JSRP1Q96MG2 331 aaPredicted RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 TUBA1CQ9BQE3 449 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 RIOK2Q9BVS4 552 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 FBRSQ9HAH7 460 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 CXorf21Q9HAI6 301 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 A0A0J9YVX5 310 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 PCP4L1A6NKN8 68 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 DISC1C4P0D8 188 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 ZBTB11O95625 1053 aaPredicted RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 HPRP00739 348 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 IFNA21P01568 189 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 EPCAMP16422 314 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 ERP29P30040 261 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 DUSP3P51452 185 aaPredicted RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 ADAM15Q13444 863 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 FASTKD3Q14CZ7 662 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 ARSIQ5FYB1 569 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 PRPF38BQ5VTL8 546 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 MEDAGQ5VYS4 303 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 SLC8B1Q6J4K2 584 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 GID4Q8IVV7 300 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 DCUN1D3Q8IWE4 304 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 FITM2Q8N6M3 262 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 CCDC115Q96NT0 180 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 TVP23BQ9NYZ1 205 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 NLGN3Q9NZ94 848 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 MGAT4BQ9UQ53 548 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 CLCA3PQ9Y6N3 262 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 SMCO3A2RU48 225 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 A8MT66 165 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 ARPC2O15144 300 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 MT-CYBP00156 380 aaPredicted RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 ALPIP09923 528 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 UQCRC2P22695 453 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 EDNRAP25101 427 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 GRIA2P42262 883 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 TSPAN5P62079 268 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 PYHIN1Q6K0P9 492 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 POMZP3Q6PJE2 187 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 RELL1Q8IUW5 271 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 CMASQ8NFW8 434 aaPredicted RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 KLHL6Q8WZ60 621 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 OSTF1Q92882 214 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 ZUFSPQ96AP4 578 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 LRRC46Q96FV0 321 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 FBXL18Q96ME1 805 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 AIFM2Q9BRQ8 373 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 TRMT61BQ9BVS5 477 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 PNO1Q9NRX1 252 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 PTBP2Q9UKA9 531 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 TBC1D24Q9ULP9 559 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 NDRG2Q9UN36 371 aaKnown RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 POMPQ9Y244 141 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 TCRBV7S2A1N4TA0A589 114 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 YJEFN3A6XGL0 299 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 ACOX3O15254 700 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 LINGO3P0C6S8 592 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 C7P10643 843 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 HSD3B1P14060 373 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 LMO2P25791 158 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 HSD3B2P26439 372 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 SHMT2P34897 504 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 OR3A3P47888 321 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 OR3A2P47893 321 aa7.03□□□□□ -1.28
CPS1-201ENST00000233072 ZNF41P51814 821 aaPredicted RBP7.03□□□□□ -1.28
CPS1-201ENST00000233072 GDF10P55107 478 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms