RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ERVW-1Q9UQF0 538 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 HSPE1-MOB4S4R3N1 261 aa16.77■□□□□ 0.27
USB1-201ENST00000219281 UPK3BL1B0FP48 263 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 UPK3BL2E5RIL1 263 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 CLIC1O00299 241 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 FPGTO14772 594 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 FPR1P21462 350 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 MAPK1P28482 360 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 MAGEA10P43363 369 aaPredicted RBP16.76■□□□□ 0.27
USB1-201ENST00000219281 SERPINB10P48595 397 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 ST13P50502 369 aaKnown RBP16.76■□□□□ 0.27
USB1-201ENST00000219281 TLE2Q04725 743 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 MAD2L1BPQ15013 274 aaPredicted RBP16.76■□□□□ 0.27
USB1-201ENST00000219281 VMACQ2NL98 169 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 TMCO2Q7Z6W1 182 aaPredicted RBP16.76■□□□□ 0.27
USB1-201ENST00000219281 ZSWIM9Q86XI8 627 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 ZZZ3Q8IYH5 903 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 ELMOD1Q8N336 334 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 OR6Q1Q8NGQ2 317 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 DYNC2LI1Q8TCX1 351 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 PANX1Q96RD7 426 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 RNF208Q9H0X6 261 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 TMEM165Q9HC07 324 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 ACOT13Q9NPJ3 140 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 KIF17Q9P2E2 1029 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 NDRG4Q9ULP0 352 aaKnown RBP16.76■□□□□ 0.27
USB1-201ENST00000219281 SAMHD1Q9Y3Z3 626 aaKnown RBP16.76■□□□□ 0.27
USB1-201ENST00000219281 KRT87PA6NCN2 255 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 ZBBXA8MT70 800 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 ABLIM3O94929 683 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 KCNK5O95279 499 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 FKBP9O95302 570 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 AMD1P17707 334 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 TGFBR1P36897 503 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 NSG1P42857 185 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 KIR3DL1P43629 444 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 RPS3AP61247 264 aaKnown RBP16.76■□□□□ 0.27
USB1-201ENST00000219281 FPGSQ05932 587 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 DNASE1L3Q13609 305 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 DUOXA1Q1HG43 343 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 ZNF621Q6ZSS3 439 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 TPGS1Q6ZTW0 290 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 FAM9CQ8IZT9 166 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 DCAF4L2Q8NA75 395 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 HJURPQ8NCD3 748 aaPredicted RBP16.76■□□□□ 0.27
USB1-201ENST00000219281 RPL3LQ92901 407 aaKnown RBP16.76■□□□□ 0.27
USB1-201ENST00000219281 ITPKCQ96DU7 683 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 HSH2DQ96JZ2 352 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 DPH2Q9BQC3 489 aaPredicted RBP16.76■□□□□ 0.27
USB1-201ENST00000219281 ASPSCR1Q9BZE9 553 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 FBXO8Q9NRD0 319 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 KRT84Q9NSB2 600 aa16.76■□□□□ 0.27
USB1-201ENST00000219281 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.75■□□□□ 0.27
USB1-201ENST00000219281 SEMG1P04279 462 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 CBSLP0DN79 551 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 KDELR2P33947 212 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 CBSP35520 551 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 HALP42357 657 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 EIF2B2P49770 351 aaKnown RBP16.75■□□□□ 0.27
USB1-201ENST00000219281 HSPA14Q0VDF9 509 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 HIST2H2ACQ16777 129 aaPredicted RBP16.75■□□□□ 0.27
USB1-201ENST00000219281 PTCHD3Q3KNS1 767 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 NOXRED1Q6NXP6 359 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 NEK5Q6P3R8 708 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 LINC00299Q6ZSB3 139 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 NCCRP1Q6ZVX7 275 aaPredicted RBP16.75■□□□□ 0.27
USB1-201ENST00000219281 LRRC70Q7Z2Q7 622 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 SVOPQ8N4V2 548 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 ATG16L2Q8NAA4 619 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 ZNF461Q8TAF7 563 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 SLC22A12Q96S37 553 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 REXO4Q9GZR2 422 aaKnown RBP16.75■□□□□ 0.27
USB1-201ENST00000219281 STOML2Q9UJZ1 356 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 RPS6KA6Q9UK32 745 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 PNMA8BQ9ULN7 279 aaPredicted RBP16.75■□□□□ 0.27
USB1-201ENST00000219281 NPIPB15A6NHN6 443 aaPredicted RBP16.75■□□□□ 0.27
USB1-201ENST00000219281 PRAMEF4O60810 478 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 CPSF4O95639 269 aaKnown RBP16.75■□□□□ 0.27
USB1-201ENST00000219281 ITPKAP23677 461 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 PRPH2P23942 346 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 KRT20P35900 424 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 B4GALNT1Q00973 533 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 TRIM60Q495X7 471 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 GGTA1PQ4G0N0 100 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 PRAMEF9Q5VWM5 478 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 KIAA1841Q6NSI8 718 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 CCDC71Q8IV32 467 aaPredicted RBP16.75■□□□□ 0.27
USB1-201ENST00000219281 HHIPQ96QV1 700 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 BTBD2Q9BX70 525 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 SLC22A14Q9Y267 594 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 TMED5Q9Y3A6 229 aa16.75■□□□□ 0.27
USB1-201ENST00000219281 LCKP06239 509 aa16.74■□□□□ 0.27
USB1-201ENST00000219281 CCL5P13501 91 aa16.74■□□□□ 0.27
USB1-201ENST00000219281 FUT4P22083 530 aa16.74■□□□□ 0.27
USB1-201ENST00000219281 TRPC1P48995 793 aa16.74■□□□□ 0.27
USB1-201ENST00000219281 KIAA1614Q5VZ46 1190 aa16.74■□□□□ 0.27
USB1-201ENST00000219281 PDE12Q6L8Q7 609 aaKnown RBP16.74■□□□□ 0.27
USB1-201ENST00000219281 RETSATQ6NUM9 610 aa16.74■□□□□ 0.27
USB1-201ENST00000219281 TSPYL5Q86VY4 417 aaPredicted RBP16.74■□□□□ 0.27
USB1-201ENST00000219281 PTOV1Q86YD1 416 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms