RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 RETP07949 1114 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 RFC2P35250 354 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ETV6P41212 452 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MAGEA11P43364 429 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 AP2S1P53680 142 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 TARDBPQ13148 414 aaKnown RBP eCLIP4.3□□□□□ -1.72
CHD9-201ENST00000219084 CLCA4Q14CN2 919 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 KCNN1Q92952 543 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 RFT1Q96AA3 541 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 L3HYPDHQ96EM0 354 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 LRIG1Q96JA1 1093 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 SUSD3Q96L08 255 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 KCNH6Q9H252 994 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MKKSQ9NPJ1 570 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 SCP2D1Q9UJQ7 156 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MAP4K5Q9Y4K4 846 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 LRRN3E7EW58 273 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CLIC1O00299 241 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 SCAMP3O14828 347 aaKnown RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 ITM2AO43736 263 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MATN4O95460 622 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 APODP05090 189 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 SELPP16109 830 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ZNF182P17025 639 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 UQCRC2P22695 453 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ECHS1P30084 290 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 SOX9P48436 509 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CSTF1Q05048 431 aaKnown RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 RING1Q06587 406 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ST3GAL3Q11203 375 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 HSD17B12Q53GQ0 312 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PIGGQ5H8A4 983 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 COLEC12Q5KU26 742 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 OTOP3Q7RTS5 596 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ZSWIM9Q86XI8 627 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MFSD3Q96ES6 412 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 SLC39A3Q9BRY0 314 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 LRRN3Q9H3W5 708 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 C11orf16Q9NQ32 467 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 EMC3Q9P0I2 261 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MRPS7Q9Y2R9 242 aaKnown RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 OARD1Q9Y530 152 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 AHDC1Q5TGY3 1603 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 A0A1B0GVI7 797 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MOXD2PA6NHM9 499 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 HTRA2O43464 458 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 PCDH7O60245 1069 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 NUAK1O60285 661 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ATP6V1G1O75348 118 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CREG1O75629 220 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 GLUD1P00367 558 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 SYN1P17600 705 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 RHCEP18577 417 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 RORAP35398 523 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 HLCSP50747 726 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 HNRNPFP52597 415 aaKnown RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 ARSFP54793 590 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 GNG2P59768 71 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 GRB14Q14449 540 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ZNF234Q14588 700 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 LRIF1Q5T3J3 769 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 NPAS4Q8IUM7 802 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 BBS10Q8TAM1 723 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CEP76Q8TAP6 659 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 UNKLQ9H9P5 680 aaKnown RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 MS4A12Q9NXJ0 267 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PGAP2Q9UHJ9 254 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 EIF1AYO14602 144 aaKnown RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 PPEF2O14830 753 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 TMEM63AO94886 807 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 OAZ2O95190 189 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ERCC1P07992 297 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 VEGFAP15692 232 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 EIF1AXP47813 144 aaKnown RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 TPTEP56180 551 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 KANK2Q63ZY3 851 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 RNF19BQ6ZMZ0 732 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PRSS48Q7RTY5 328 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 TSPYL5Q86VY4 417 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 CERS5Q8N5B7 392 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 COX18Q8N8Q8 333 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 GDPD1Q8N9F7 314 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 THAP6Q8TBB0 222 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 COL26A1Q96A83 441 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PNPLA2Q96AD5 504 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 C12orf43Q96C57 262 aaKnown RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 KLRG1Q96E93 195 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 BORCS6Q96GS4 357 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PGLYRP2Q96PD5 576 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 TSSK3Q96PN8 268 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CITED4Q96RK1 184 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ANKRD60Q9BZ19 345 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CD93Q9NPY3 652 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 TMEM39AQ9NV64 488 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 GPRC5BQ9NZH0 403 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 EIF2B4Q9UI10 523 aaKnown RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 ERVK-11Q9UQG0 969 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 LIPT1Q9Y234 373 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 NR2E3Q9Y5X4 410 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 RGPD3A6NKT7 1758 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms