RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 STX5Q13190 355 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 MAD2L1Q13257 205 aaPredicted RBP11.86□□□□□ -0.51
SNU13-201ENST00000215956 RPS6KA2Q15349 733 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 SMU1Q2TAY7 513 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 GGTA1PQ4G0N0 100 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 CDCP2Q5VXM1 449 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 TBC1D3GQ6DHY5 549 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 TBC1D3CQ6IPX1 549 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 OGFOD2Q6N063 350 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 CYB5D1Q6P9G0 228 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 LARP4Q71RC2 724 aaKnown RBP eCLIP11.86□□□□□ -0.513e-7■■■□□ 15.6
SNU13-201ENST00000215956 LRRTM4Q86VH4 590 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 IQCHQ86VS3 1027 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 HORMAD1Q86X24 394 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 TBC1D3Q8IZP1 549 aaPredicted RBP11.86□□□□□ -0.51
SNU13-201ENST00000215956 DENND6BQ8NEG7 585 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 SNRNP27Q8WVK2 155 aaKnown RBP11.86□□□□□ -0.51
SNU13-201ENST00000215956 TUBGCP3Q96CW5 907 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 MED8Q96G25 268 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 DEPDC7Q96QD5 511 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 TMEM79Q9BSE2 394 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 C1QTNF2Q9BXJ5 285 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 TEX101Q9BY14 249 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 DNAJC11Q9NVH1 559 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 TAS2R1Q9NYW7 299 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 ATXN10Q9UBB4 475 aa11.86□□□□□ -0.51
SNU13-201ENST00000215956 KIF26BQ2KJY2 2108 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 UBR5O95071 2799 aaPredicted RBP11.85□□□□□ -0.51
SNU13-201ENST00000215956 KMOO15229 486 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 GSC2O15499 205 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 WFS1O76024 890 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 OR4F21O95013 312 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 KRT6AP02538 564 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 KRT6BP04259 564 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 KRT16P08779 473 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 KRT6CP48668 564 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 WSCD2Q2TBF2 565 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 ATP6AP1LQ52LC2 224 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 WASHC2DQ5SRD0 308 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 UNC5DQ6UXZ4 953 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 HEATR4Q86WZ0 1026 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 SPNS2Q8IVW8 549 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 KLHDC8AQ8IYD2 350 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 BEND7Q8N7W2 519 aaPredicted RBP11.85□□□□□ -0.51
SNU13-201ENST00000215956 PHC3Q8NDX5 983 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 OR4F6Q8NGB9 312 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 DLG3Q92796 817 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 PPP3R2Q96LZ3 170 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 DPH1Q9BZG8 443 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 MRPL40Q9NQ50 206 aaKnown RBP11.85□□□□□ -0.51
SNU13-201ENST00000215956 SNX6Q9UNH7 406 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 COPG1Q9Y678 874 aaKnown RBP11.85□□□□□ -0.51
SNU13-201ENST00000215956 DOPEY2Q9Y3R5 2298 aa11.85□□□□□ -0.51
SNU13-201ENST00000215956 COL27A1Q8IZC6 1860 aaPredicted RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 ZNF839A8K0R7 811 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 BBIP1A8MTZ0 92 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 PSMD12O00232 456 aaPredicted RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 CHUKO15111 745 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 RGS14O43566 566 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 MGRN1O60291 552 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 RNGTTO60942 597 aaKnown RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 POP7O75817 140 aaKnown RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 CLDN9O95484 217 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 JUNP05412 331 aaKnown RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 HOXC4P09017 264 aaPredicted RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 MYCLP1P12525 358 aaPredicted RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 ZNF8P17098 575 aaPredicted RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 PBLDP30039 288 aaPredicted RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 MAT2AP31153 395 aaKnown RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 TRIM23P36406 574 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 NUDT1P36639 197 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 PGM1P36871 562 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 HSD17B2P37059 387 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 SLC6A12P48065 614 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 LSSP48449 732 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 PNLIPRP1P54315 467 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 TRAF3Q13114 568 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 CUL3Q13618 768 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 FASTKQ14296 549 aaKnown RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 XKR7Q5GH72 579 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 ZNF648Q5T619 568 aaPredicted RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 RINLQ6ZS11 566 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 AMZ2Q86W34 360 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 VRK3Q8IV63 474 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 CFAP206Q8IYR0 622 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 MIER2Q8N344 545 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 SLC25A45Q8N413 288 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 CDYL2Q8N8U2 506 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 SNX31Q8N9S9 440 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 OR4C6Q8NH72 309 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 TSPEARQ8WU66 669 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 NAT14Q8WUY8 206 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 LENG8Q96PV6 779 aaPredicted RBP11.84□□□□□ -0.51
SNU13-201ENST00000215956 SERPINI1Q99574 410 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 SLC25A23Q9BV35 468 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 SLC17A9Q9BYT1 436 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 AKTIPQ9H8T0 292 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 ACTR8Q9H981 624 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 POLR1BQ9H9Y6 1135 aa11.84□□□□□ -0.51
SNU13-201ENST00000215956 EFCAB1Q9HAE3 211 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms