RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Ufm1P61961 85 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tsc22d1P62500 1077 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Slc13a5Q67BT3 572 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tlr12Q6QNU9 906 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nrde2Q80XC6 1172 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Q8BP99 230 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Peli3Q8BXR6 445 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Epsti1Q8VDI1 314 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 BsndQ8VIM4 307 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rpe65Q91ZQ5 533 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Def8Q99J78 448 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Susd3Q9D176 269 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ampd2Q9DBT5 798 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Plscr1Q9JJ00 328 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Sars2Q9JJL8 518 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Dyrk1bQ9Z188 629 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Casp8O89110 480 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 BckdhaP50136 442 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 CtnsP57757 367 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rad51Q08297 339 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ap5b1Q3TAP4 876 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gpr149Q3UVY1 732 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Pcdhga7Q6DD96 935 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Pfkfb4Q6DTY7 469 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zc3h11aQ6NZF1 792 aaKnown RBP8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 FukQ7TMC8 1090 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Lats2Q7TSJ6 1042 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fbxo46Q8BG80 603 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cdh7Q8BM92 785 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 TpbglQ8C013 384 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Acsm2Q8K0L3 575 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr48Q8VGN4 301 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Dnajc9Q91WN1 259 aaKnown RBP8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 NsdhlQ9R1J0 362 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rai1Q61818 1889 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zfp808B8JJZ4 753 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Vmn2r114E9Q281 856 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 P01665 111 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 P01666 111 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fcgr3P08508 261 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Sod2P09671 222 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Anxa6P14824 673 aaKnown RBP8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Serpind1P49182 478 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Mnat1P51949 309 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gal3st3P61315 431 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 MybphP70402 483 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 TgfbiP82198 683 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 4930430A15RikQ05AC5 485 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Kcnc2Q14B80 642 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Riiad1Q3KNY5 119 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Slc30a10Q3UVU3 470 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Pcnx4Q3UVY5 1174 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Hipk4Q3V016 616 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Taar7bQ5QD11 358 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Foxs1Q61574 329 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zmiz1Q6P1E1 1072 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Pced1aQ6P1Z5 449 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 SvoplQ6PDF3 494 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fbxo42Q6PDJ6 717 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tas2r131Q7M708 310 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr1313Q7TQW8 311 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 ZfatQ7TS63 1237 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 PreplQ8C167 725 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ccdc90bQ8C3X2 256 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Dcun1d3Q8K0V2 304 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nfatc4Q8K120 901 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Stx19Q8R1Q0 292 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Sh3glb2Q8R3V5 400 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Clptm1Q8VBZ3 664 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Klrb1fQ8VD98 217 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Frmd4bQ920B0 1035 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Dpy30Q99LT0 99 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Exosc7Q9D0M0 291 aaKnown RBP8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 5330417H12RikQ9D3P2 110 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Hapln2Q9ESM3 341 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tas2r119Q9JKT2 335 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Frem2Q6NVD0 3160 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr634-ps1A0A1B0GRN7 318 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 SelenonD3Z2R5 557 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 1700011I03RikE9PYL8 271 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm2832F7AEC7 200 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fam71e2L7N480 754 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gstm6O35660 218 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zw10O54692 779 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Lgals7O54974 136 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 GnazO70443 355 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Akap10O88845 662 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tyrp1P07147 537 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tacr2P30549 384 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tmem173Q3TBT3 378 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 GmncQ3URY2 333 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr463Q5SW49 311 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr462Q5SW50 311 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Znf366Q6NS86 746 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tas2r39Q7TQA5 319 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fbxo30Q8BJL1 746 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gsg1Q8R1W2 324 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nsmce2Q91VT1 247 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ptgr1Q91YR9 329 aa8.42□□□□□ -1.06
Trim39-201ENSMUST00000042717 Mrpl37Q921S7 423 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 68.3 ms