RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Acss2Q9QXG4 701 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Otud3B1AZ99 396 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr543E9PWI5 336 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Arhgap40E9Q6X9 672 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dhcr7O88455 471 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Tuba3aP05214 450 aaKnown RBP15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 StimateQ3UF25 288 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Prss36Q5K2P8 849 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Lcp2Q60787 533 aaKnown RBP15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rbm45Q8BHN5 476 aaKnown RBP15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cyp20a1Q8BKE6 462 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Serpinb9dQ8BMT0 377 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rbms3Q8BWL5 431 aaKnown RBP15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Scamp1Q8K021 338 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Chil4Q91Z98 402 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Fads1Q920L1 447 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 XpotQ9CRT8 963 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 D10Jhu81eQ9D172 266 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Uba7Q9DBK7 977 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Spint1Q9R097 507 aa15.79■□□□□ 0.12
Trim28-201ENSMUST00000005705 Gm30302A0A1Y7VN40 1110 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Nlrp1bA1Z198 1177 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ccdc163A2AGD7 326 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr1247A2AT78 314 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Serpinb9eO08806 377 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cd93O89103 644 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Zfp37P17141 594 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cdc25bP30306 576 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 NfycP70353 335 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Cry1P97784 606 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Zdhhc11Q14AK4 347 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dok6Q2MHE5 331 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Prickle1Q3U5C7 832 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rnf43Q5NCP0 784 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 GkQ64516 559 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Tusc1Q673H1 205 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Mup21Q80YX8 181 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Eme1Q8BJW7 570 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Clec9aQ8BRU4 238 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Tigd4Q8BUZ3 513 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Fam126bQ8C729 530 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Unc5aQ8K1S4 898 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Glcci1Q8K3I9 537 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Blzf1Q8R2X8 403 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Znf639Q99KZ6 485 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Igkv5-43A0A0B4J1J2 115 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 A0A286YDU1 74 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Krt28A6BLY7 462 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Skint11A7XV14 364 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 E9Q0B3 247 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Vmn2r91E9Q2U5 856 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Gm3488M0QW81 238 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Oaz2O08608 189 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Mkln1O89050 735 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rab23P35288 237 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Tmem181aQ3U3W2 474 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Stard3Q61542 446 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ppp2r2bQ6ZWR4 443 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr538Q7TRT5 310 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Bcas1Q80YN3 633 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 H2-M10.2Q85ZW9 329 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Kctd11Q8K485 232 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 1700034I23RikQ9D9Q3 184 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 Nectin1Q9JKF6 515 aa15.78■□□□□ 0.12
Trim28-201ENSMUST00000005705 A6H6Q4 206 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Slc25a54B1AUS6 473 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Gm340F6RGI3 1242 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Zfp607bG3X9H3 648 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Pcsk2P21661 637 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Igfbp5Q07079 271 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ccdc61Q3UJV1 511 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Vmn1r188Q8K3N2 308 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr1310Q8VF85 312 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Dlg2Q91XM9 852 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 MINDY3Q9CV28 444 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ddx28Q9CWT6 540 aaKnown RBP15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 NarfQ9CYQ7 462 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 TrilQ9DBY4 809 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Vmn1r25H3BLP0 302 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Lhx8O35652 367 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 GzmcP08882 248 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Tacr2P30549 384 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Fubp3Q3TIX6 575 aaKnown RBP15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Sfmbt2Q5DTW2 938 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Trpc1Q61056 793 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Itga7Q61738 1179 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Atg16l2Q6KAU8 623 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr1355Q7TQU9 310 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Tmem184bQ8BG09 407 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Prdx6bQ8BG37 224 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Rnf8Q8VC56 488 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Olfr441Q8VFS5 310 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Ccdc81Q9D5W4 654 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Fgf22Q9ESS2 162 aa15.77■□□□□ 0.12
Trim28-201ENSMUST00000005705 Gm7173A0A0G2JEB6 3132 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Chd3B1AR17 2055 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm43796A0A0J9YV32 372 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Olfr1375A0A0N4SUP0 313 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Gm6592A2AHC7 168 aa15.77■□□□□ 0.11
Trim28-201ENSMUST00000005705 Neurod4O09105 330 aa15.77■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms