RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 GNAZP19086 355 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 SDHBP21912 280 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 GRK2P25098 689 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 CASP2P42575 452 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 PPM1FP49593 454 aaPredicted RBP11.87□□□□□ -0.51
LINC00339-213ENST00000642137 CLCQ05315 142 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 GALNT1Q10472 559 aaPredicted RBP11.87□□□□□ -0.51
LINC00339-213ENST00000642137 NAA25Q14CX7 972 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 PDK4Q16654 411 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 CFAP157Q5JU67 520 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 IRGCQ6NXR0 463 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 GOLGA7Q7Z5G4 137 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 TAX1BP1Q86VP1 789 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 C17orf64Q86WR6 236 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 CCNYL1Q8N7R7 359 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 SNX31Q8N9S9 440 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 DEFB124Q8NES8 71 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 OR2L3Q8NG85 312 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 RAB3IL1Q8TBN0 382 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 GFM1Q96RP9 751 aaKnown RBP11.87□□□□□ -0.51
LINC00339-213ENST00000642137 TRMOQ9BU70 441 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 NTMT1Q9BV86 223 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 ACAT2Q9BWD1 397 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 PITPNM3Q9BZ71 974 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 GSTO2Q9H4Y5 243 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 MANSC1Q9H8J5 431 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 IPPKQ9H8X2 491 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 ZBTB26Q9HCK0 441 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 MRPS30Q9NP92 439 aaKnown RBP11.87□□□□□ -0.51
LINC00339-213ENST00000642137 C1GALT1Q9NS00 363 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 ABCF3Q9NUQ8 709 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 TMEM184CQ9NVA4 438 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 SEMA5BQ9P283 1151 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 ANKMY1Q9P2S6 941 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 POMT2Q9UKY4 750 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 KLK4Q9Y5K2 254 aa11.87□□□□□ -0.51
LINC00339-213ENST00000642137 EP300Q09472 2414 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-213ENST00000642137 DNAH14Q0VDD8 3507 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 A0A0J9YY10 115 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 TOX3O15405 576 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-213ENST00000642137 SNUPNO95149 360 aaKnown RBP11.86□□□□□ -0.51
LINC00339-213ENST00000642137 MLYCDO95822 493 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 SERPINE1P05121 402 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 C1GALT1C1LP0DN25 315 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 EPORP19235 508 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 PSMB5P28074 263 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 ATP1A2P50993 1020 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 CDH13P55290 713 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 STX3Q13277 289 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 E2F2Q14209 437 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 CHI3L2Q15782 390 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 TBCCQ15814 346 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 KIAA1614Q5VZ46 1190 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 LIPJQ5W064 366 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 ATG9BQ674R7 924 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 ATG16L1Q676U5 607 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 FIGLAQ6QHK4 219 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 NXPE4Q6UWF7 544 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 ZNF574Q6ZN55 896 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-213ENST00000642137 FRMD7Q6ZUT3 714 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 HOMEZQ8IX15 550 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 ABHD11Q8NFV4 315 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 OR4K1Q8NGD4 311 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 OR4D9Q8NGE8 314 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 PPP1R14CQ8TAE6 165 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 DYDC1Q8WWB3 177 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 CKAP2Q8WWK9 683 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 SLC5A11Q8WWX8 675 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 NEIL2Q969S2 332 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 ATP6V1E2Q96A05 226 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 MOCOSQ96EN8 888 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 TGM7Q96PF1 710 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 TRAPPC9Q96Q05 1148 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 MAP3K3Q99759 626 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 DRC3Q9H069 523 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 SEMA6CQ9H3T2 930 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 EHD1Q9H4M9 534 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 NOL11Q9H8H0 719 aaKnown RBP11.86□□□□□ -0.51
LINC00339-213ENST00000642137 PELI2Q9HAT8 420 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 TOR4AQ9NXH8 423 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 ATXN7L1Q9ULK2 861 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-213ENST00000642137 SNX7Q9UNH6 387 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 STK38LQ9Y2H1 464 aa11.86□□□□□ -0.51
LINC00339-213ENST00000642137 MN1Q10571 1320 aaPredicted RBP11.86□□□□□ -0.51
LINC00339-213ENST00000642137 HEATR5BQ9P2D3 2071 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 VPS13AQ96RL7 3174 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 TLCD2A6NGC4 264 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 TMEM114B3SHH9 223 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 OR7A17O14581 309 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 KLF11O14901 512 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 UGDHO60701 494 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 WFS1O76024 890 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 DKK1O94907 266 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 OTCP00480 354 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 EBLN1P0CF75 366 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
LINC00339-213ENST00000642137 BGNP21810 368 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 CDH3P22223 829 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 CXCR2P25025 360 aa11.85□□□□□ -0.51
LINC00339-213ENST00000642137 CSF2RBP32927 897 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms