RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 VPS37BQ9H9H4 285 aa13.26□□□□□ -0.29
HLA-C-210ENST00000640219 SUCOQ9UBS9 1254 aaKnown RBP13.26□□□□□ -0.29
HLA-C-210ENST00000640219 SLC24A2Q9UI40 661 aa13.26□□□□□ -0.29
HLA-C-210ENST00000640219 CFAP20Q9Y6A4 193 aaKnown RBP13.26□□□□□ -0.29
HLA-C-210ENST00000640219 SPG11Q96JI7 2443 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 TCRBV7S3A2A0A539 114 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 TLCD2A6NGC4 264 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 C2orf81A6NN90 581 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 PEX12O00623 359 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 SGTAO43765 313 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 TSFMP43897 325 aaKnown RBP13.25□□□□□ -0.29
HLA-C-210ENST00000640219 MNAT1P51948 309 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 CRADDP78560 199 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 GTF2H3Q13889 308 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 HIF1AQ16665 826 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 TMTC4Q5T4D3 741 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 FBXW10Q5XX13 1052 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 TRPM8Q7Z2W7 1104 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 MRGPRGQ86SM5 289 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 PPIL6Q8IXY8 311 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 ZNF808Q8N4W9 903 aaPredicted RBP13.25□□□□□ -0.29
HLA-C-210ENST00000640219 GPR150Q8NGU9 434 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 NRTNQ99748 197 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 ARNT2Q9HBZ2 717 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 PCMTD2Q9NV79 361 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 CRLS1Q9UJA2 301 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 PADI2Q9Y2J8 665 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 ARL2BPQ9Y2Y0 163 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 ZGRF1Q86YA3 2104 aa13.25□□□□□ -0.29
HLA-C-210ENST00000640219 GPR89AB7ZAQ6 455 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 C9J4A7 227 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 KMOO15229 486 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 VEGFDO43915 354 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 JRKO75564 520 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 POP7O75817 140 aaKnown RBP13.24□□□□□ -0.29
HLA-C-210ENST00000640219 ZBTB11O95625 1053 aaPredicted RBP13.24□□□□□ -0.29
HLA-C-210ENST00000640219 CRTAMO95727 393 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 APRTP07741 180 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 GPR89BP0CG08 455 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 CD1EP15812 388 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 MSH3P20585 1137 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 IDSP22304 550 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 SLC18A1P54219 525 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 BASP1P80723 227 aaKnown RBP13.24□□□□□ -0.29
HLA-C-210ENST00000640219 ABRQ12979 859 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 CDC16Q13042 620 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 ITGA9Q13797 1035 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 SSPNQ14714 243 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 PLCL1Q15111 1095 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 RASA2Q15283 850 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 TMED2Q15363 201 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 PTCHD3Q3KNS1 767 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 AGAP9Q5VTM2 703 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 WASH2PQ6VEQ5 465 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 NAPRTQ6XQN6 538 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 PIANPQ8IYJ0 282 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 DNAAF3Q8N9W5 541 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 DNAJB14Q8TBM8 379 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 PPP4R1Q8TF05 950 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 SRPK1Q96SB4 655 aaKnown RBP13.24□□□□□ -0.29
HLA-C-210ENST00000640219 SMC6Q96SB8 1091 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 SLX1AQ9BQ83 275 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 SOHLH2Q9NX45 425 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 PRSS21Q9Y6M0 314 aa13.24□□□□□ -0.29
HLA-C-210ENST00000640219 ANKHD1Q8IWZ3 2542 aaKnown RBP13.23□□□□□ -0.29
HLA-C-210ENST00000640219 MASP2O00187 686 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 TP73O15350 636 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 SNX3O60493 162 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 F7P08709 466 aaPredicted RBP13.23□□□□□ -0.29
HLA-C-210ENST00000640219 KRT15P19012 456 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 HADHAP40939 763 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 GTF2A1P52655 376 aaPredicted RBP13.23□□□□□ -0.29
HLA-C-210ENST00000640219 SOX8P57073 446 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 SESN2P58004 480 aaPredicted RBP13.23□□□□□ -0.29
HLA-C-210ENST00000640219 SNCBQ16143 134 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 KLHL38Q2WGJ6 581 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 LDLRAP1Q5SW96 308 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 FCRL6Q6DN72 434 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 FAM180AQ6UWF9 173 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 ZNF534Q76KX8 674 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 TAS2R42Q7RTR8 314 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 SPATA21Q7Z572 469 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 SPNS2Q8IVW8 549 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 CCDC63Q8NA47 563 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
HLA-C-210ENST00000640219 CCDC120Q96HB5 630 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 TRIM56Q9BRZ2 755 aaKnown RBP13.23□□□□□ -0.29
HLA-C-210ENST00000640219 TIMM29Q9BSF4 260 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 DHRS4Q9BTZ2 278 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 FANCEQ9HB96 536 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 OLAHQ9NV23 265 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 NLE1Q9NVX2 485 aaPredicted RBP13.23□□□□□ -0.29
HLA-C-210ENST00000640219 KLHL14Q9P2G3 628 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 FETUBQ9UGM5 382 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 TBK1Q9UHD2 729 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 FER1L5A0AVI2 2057 aa13.23□□□□□ -0.29
HLA-C-210ENST00000640219 MYO7BQ6PIF6 2116 aa13.22□□□□□ -0.29
HLA-C-210ENST00000640219 CCDC162PA2VCL2 907 aa13.22□□□□□ -0.29
HLA-C-210ENST00000640219 POC1B-GALNT4F8VUJ3 575 aa13.22□□□□□ -0.29
HLA-C-210ENST00000640219 PRPF4O43172 522 aaKnown RBP eCLIP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms