RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 FASTKQ14296 549 aaKnown RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 TPSAB1Q15661 275 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 LONRF1Q17RB8 773 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 TYSND1Q2T9J0 566 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 NADK2Q4G0N4 442 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 LACTB2Q53H82 288 aaPredicted RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 PRR30Q53SZ7 412 aaPredicted RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 C1orf189Q5VU69 101 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 MRPL14Q6P1L8 145 aaKnown RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 ZNF549Q6P9A3 640 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 COX15Q7KZN9 410 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 SYVN1Q86TM6 617 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 TAX1BP1Q86VP1 789 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 TDRPQ86YL5 185 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 ZBED8Q8IZ13 594 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 MCUQ8NE86 351 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 FDCSPQ8NFU4 85 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 OR6P1Q8NGX9 317 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 OR8K5Q8NH50 307 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 LRRC39Q96DD0 335 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 PWWP2AQ96N64 755 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 NUDT9Q9BW91 350 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 NLNQ9BYT8 704 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 ACTR5Q9H9F9 607 aaPredicted RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 VPS37BQ9H9H4 285 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 ENAMQ9NRM1 1142 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 OR6C2Q9NZP2 312 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 DHCR7Q9UBM7 475 aaKnown RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 ACTL7BQ9Y614 415 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 MDC1Q14676 2089 aaKnown RBP7.54□□□□□ -1.2
PNKP-229ENST00000637897 ICE1Q9Y2F5 2266 aa7.54□□□□□ -1.2
PNKP-229ENST00000637897 RP1L1Q8IWN7 2480 aaPredicted RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 PCM1Q15154 2024 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 IGKV1-8A0A0C4DH67 115 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 A0A0J9YY10 115 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 GOLGA8MH3BSY2 632 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 MATN2O00339 956 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 RFPL1O75677 317 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 SORBS2O94875 1100 aaKnown RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 VAPBO95292 243 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 ONECUT2O95948 504 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 FTH1P02794 183 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 GSTA2P09210 222 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 OR56A5P0C7T3 313 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 ERGP11308 486 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 CD9P21926 228 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 LSP1P33241 339 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 SHMT2P34897 504 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 GRIA3P42263 894 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 SLCO1A2P46721 670 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 UQCRFS1P47985 274 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 RAB28P51157 221 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 PRKAA1Q13131 559 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 ATP1A4Q13733 1029 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 KRT33BQ14525 404 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 NCF4Q15080 339 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 SLC5A12Q1EHB4 618 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 ZXDCQ2QGD7 858 aaPredicted RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 KLHL38Q2WGJ6 581 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 ACSBG2Q5FVE4 666 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 UBAP2Q5T6F2 1119 aaKnown RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 RHBDD2Q6NTF9 364 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 ARMC6Q6NXE6 501 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 CYHR1Q6ZMK1 362 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 PALM2Q8IXS6 379 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 CNPY4Q8N129 248 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 ARHGEF39Q8N4T4 335 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 ZNF655Q8N720 491 aaPredicted RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 RBMXL3Q8N7X1 1067 aaKnown RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 INPP5DQ92835 1189 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 FAM136AQ96C01 138 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 WDR83Q9BRX9 315 aaKnown RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 ING2Q9H160 280 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 MRM3Q9HC36 420 aaKnown RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 ZBTB20Q9HC78 741 aaPredicted RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 LRRC4CQ9HCJ2 640 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 XAB2Q9HCS7 855 aaKnown RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 CATSPERZQ9NTU4 200 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 SENP1Q9P0U3 644 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 STOX2Q9P2F5 926 aaPredicted RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 ANAPC2Q9UJX6 822 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 SOX13Q9UN79 622 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 MAN2B2Q9Y2E5 1009 aa7.53□□□□□ -1.2
PNKP-229ENST00000637897 HEMK1Q9Y5R4 338 aaPredicted RBP7.53□□□□□ -1.2
PNKP-229ENST00000637897 LOC105369274A0A096LPK9 316 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 LOC102723532A0A0G2JNH3 316 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 ARHGEF33A8MVX0 844 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 E7EQ34 232 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 MATN4O95460 622 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 S1PR4O95977 384 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 MLNP12872 115 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 GABRB3P28472 473 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 FMO4P31512 558 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 NPY2RP49146 381 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 ARL4DP49703 201 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 CCL11P51671 97 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 CLCN7P51798 805 aa7.52□□□□□ -1.21
PNKP-229ENST00000637897 PGGT1BP53609 377 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms