RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 JAK1P23458 1154 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CEACAM8P31997 349 aaPredicted RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 PSMB10P40306 273 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 EIF2DP41214 584 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 GARSP41250 739 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 NR2C2P49116 596 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CLK1P49759 484 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MMP15P51511 669 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ARSEP51690 589 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 THOP1P52888 689 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 TUBB4BP68371 445 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 UBXN2AP68543 259 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CDR2Q01850 454 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 STK4Q13043 487 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MFAP5Q13361 173 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 PPIGQ13427 754 aaKnown RBP eCLIP1.01□□□□□ -2.253e-8■□□□□ 8.3
SMARCB1-209ENST00000635578 ITPK1Q13572 414 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CUL4AQ13619 759 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 HNRNPDQ14103 355 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 IRF3Q14653 427 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MVPQ14764 893 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 KIR2DS3Q14952 304 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 E2F5Q15329 346 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC15A2Q16348 729 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 LETM2Q2VYF4 491 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ZFP69Q49AA0 526 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 BMP2KLQ5H9B9 411 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 TECRLQ5HYJ1 363 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 RAB41Q5JT25 222 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 DCAF10Q5QP82 559 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 RARS2Q5T160 578 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CCNYL2Q5T2Q4 361 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CYP4A22Q5TCH4 519 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 C6orf163Q5TEZ5 329 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 FAM205BPQ63HN1 556 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ARHGAP17Q68EM7 881 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 JADE1Q6IE81 842 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 OLFM4Q6UX06 510 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CFAP77Q6ZQR2 320 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 C1orf122Q6ZSJ8 110 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MFSD6Q6ZSS7 791 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF534Q76KX8 674 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ISCA2Q86U28 154 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 LDB1Q86U70 411 aaPredicted RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 KBTBD6Q86V97 674 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 TMEM173Q86WV6 379 aaPredicted RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 GPALPP1Q8IXQ4 340 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 RPAP2Q8IXW5 612 aaPredicted RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 EID3Q8N140 333 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 TTC30BQ8N4P2 665 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 NIPA2Q8N8Q9 360 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF383Q8NA42 475 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 TMEM178AQ8NBL3 297 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC4A11Q8NBS3 891 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 SLC38A9Q8NBW4 561 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 DDHD1Q8NEL9 900 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 OR2T12Q8NG77 320 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 OR5M8Q8NGP6 311 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 OR1J1Q8NGS3 322 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 OR2AJ1Q8NGZ0 328 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 OR2T6Q8NHC8 308 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 WDR20Q8TBZ3 569 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 FAM222BQ8WU58 562 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 FCAMRQ8WWV6 532 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 SMPDL3BQ92485 455 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 SUSD6Q92537 303 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CENPTQ96BT3 561 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 NXNL1Q96CM4 212 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ZNF689Q96CS4 500 aaPredicted RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 RSRC1Q96IZ7 334 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ART5Q96L15 291 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 C17orf77Q96MU5 243 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 SFXN2Q96NB2 322 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 OR6C1Q96RD1 312 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 SLX1AQ9BQ83 275 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 RTP3Q9BQQ7 232 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 NUDT16L1Q9BRJ7 211 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MXD3Q9BW11 206 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 NUP85Q9BW27 656 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 DGCR6LQ9BY27 220 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 KLHL4Q9C0H6 718 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MIS12Q9H081 205 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 WDR13Q9H1Z4 485 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CCDC68Q9H2F9 335 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 GHITMQ9H3K2 345 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 KCNK15Q9H427 330 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 GOLPH3LQ9H4A5 285 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 OPA3Q9H6K4 179 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 SLA2Q9H6Q3 261 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 PELI2Q9HAT8 420 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 HHATLQ9HCP6 504 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 CCDC177Q9NQR7 707 aaPredicted RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MBNL1Q9NR56 388 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 KLHL1Q9NR64 748 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 FAM120CQ9NX05 1096 aaKnown RBP1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 OSER1Q9NX31 292 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 ADPRHL2Q9NX46 363 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 DPP3Q9NY33 737 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 COQ3Q9NZJ6 369 aa1.01□□□□□ -2.25
SMARCB1-209ENST00000635578 MRPL15Q9P015 296 aaKnown RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms