RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 TRAF6Q9Y4K3 522 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 TIMM22Q9Y584 194 aa13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 COL27A1Q8IZC6 1860 aaPredicted RBP13.71□□□□□ -0.21
PHACTR4-209ENST00000633371 COL5A1P20908 1838 aaPredicted RBP13.71□□□□□ -0.22
PHACTR4-209ENST00000633371 DNAH14Q0VDD8 3507 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 LILRA5A6NI73 299 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 MATN2O00339 956 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 AZIN1O14977 448 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 B4GAT1O43505 415 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 NRP2O60462 931 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 TGDSO95455 350 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 ZNF883P0CG24 379 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 CDH1P12830 882 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 ALOX15P16050 662 aaPredicted RBP13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 POLR2CP19387 275 aaPredicted RBP13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 PIK3CGP48736 1102 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 HTR6P50406 440 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 CCNG1P51959 295 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 CFHR1Q03591 330 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 SPEM2Q0P670 501 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 CHIT1Q13231 466 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 NR1D2Q14995 579 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 PROX2Q3B8N5 592 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 SH2D4BQ5SQS7 431 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 KANK2Q63ZY3 851 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 ZCCHC8Q6NZY4 707 aaKnown RBP13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 NXPE4Q6UWF7 544 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 MILR1Q7Z6M3 343 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 FAM129CQ86XR2 697 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 CDYL2Q8N8U2 506 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 PIWIL2Q8TC59 973 aaKnown RBP13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 ATOH1Q92858 354 aaPredicted RBP13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 GRAMD1AQ96CP6 724 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 MIPEPQ99797 713 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 ELAC2Q9BQ52 826 aaKnown RBP13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 FAM107BQ9H098 131 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 SYNPO2LQ9H987 977 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 EML4Q9HC35 981 aaKnown RBP13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 EVA1BQ9NVM1 165 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 ACTR10Q9NZ32 417 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 GPRC5BQ9NZH0 403 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 ZNF490Q9ULM2 529 aaPredicted RBP13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 PADI4Q9UM07 663 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 ANGPTL3Q9Y5C1 460 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 PTGDR2Q9Y5Y4 395 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 USH1CQ9Y6N9 552 aa13.7□□□□□ -0.22
PHACTR4-209ENST00000633371 FAM221BA6H8Z2 402 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 OR5K3A6NET4 321 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 ZNF839A8K0R7 811 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 SNX3O60493 162 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 SNUPNO95149 360 aaKnown RBP13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 FAM107AO95990 144 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 OTCP00480 354 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 CAPN1P07384 714 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 EBLN1P0CF75 366 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 C1GALT1C1LP0DN25 315 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 UGT2B7P16662 529 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 TYRP1P17643 537 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 CCND1P24385 295 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 OR1D5P58170 312 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 PRDX1Q06830 199 aaKnown RBP13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 PLCL1Q15111 1095 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 TBCCQ15814 346 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 GGTA1PQ4G0N0 100 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 PERM1Q5SV97 790 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 VWA5B1Q5TIE3 1220 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 KIAA1614Q5VZ46 1190 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 ICE2Q659A1 982 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 ATG9BQ674R7 924 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 TRIM73Q86UV7 250 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 CLYBLQ8N0X4 340 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 ZNF740Q8NDX6 193 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 ABHD11Q8NFV4 315 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 OR2L3Q8NG85 312 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 OR4K1Q8NGD4 311 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 C10orf82Q8WW14 230 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 SLC5A11Q8WWX8 675 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 C3orf30Q96M34 536 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 HAUS8Q9BT25 410 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 ABCG4Q9H172 646 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 NPHS2Q9NP85 383 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 GEMIN8Q9NWZ8 242 aaKnown RBP13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 LRIT1Q9P2V4 623 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 TRPS1Q9UHF7 1281 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 KLHL20Q9Y2M5 609 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 PCDHB11Q9Y5F2 797 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 PCDHGB2Q9Y5G2 931 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 DNAJC15Q9Y5T4 150 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 KCNE2Q9Y6J6 123 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 FRYLO94915 3013 aa13.69□□□□□ -0.22
PHACTR4-209ENST00000633371 ADAMTS20P59510 1910 aa13.68□□□□□ -0.22
PHACTR4-209ENST00000633371 PIPSLA2A3N6 862 aa13.68□□□□□ -0.22
PHACTR4-209ENST00000633371 PCNX2A6NKB5 2137 aa13.68□□□□□ -0.22
PHACTR4-209ENST00000633371 ISM1B1AKI9 464 aa13.68□□□□□ -0.22
PHACTR4-209ENST00000633371 SDHDO14521 159 aa13.68□□□□□ -0.22
PHACTR4-209ENST00000633371 FFAR3O14843 346 aa13.68□□□□□ -0.22
PHACTR4-209ENST00000633371 CLGNO14967 610 aa13.68□□□□□ -0.22
PHACTR4-209ENST00000633371 GPR42O15529 346 aa13.68□□□□□ -0.22
PHACTR4-209ENST00000633371 NUDT21O43809 227 aaKnown RBP13.68□□□□□ -0.22
PHACTR4-209ENST00000633371 CLDN9O95484 217 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms