RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TMCO5AQ8N6Q1 288 aa6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 MRPL43Q8N983 215 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 HDAC2Q92769 488 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 ASIC4Q96FT7 647 aa6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 SLC22A12Q96S37 553 aa6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 CDX2Q99626 313 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 C2orf49Q9BVC5 232 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 UGT2B28Q9BY64 529 aa6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 TTYH1Q9H313 450 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 POLR1BQ9H9Y6 1135 aa6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 KCTD5Q9NXV2 234 aa6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 ZDHHC3Q9NYG2 299 aa6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 TMPRSS11EQ9UL52 423 aa6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 POLR3HQ9Y535 204 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-244ENST00000627109 ALPK3Q96L96 1907 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 NOTCH4Q99466 2003 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 KNL1Q8NG31 2342 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 GLYATL1P3A0A0U1RQE8 302 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 H3BMQ9 156 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SMAD6O43541 496 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 FOXD2O60548 495 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CTSAP10619 480 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 MBL2P11226 248 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 ITGALP20701 1170 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 MAP4P27816 1152 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 RYKP34925 604 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 NSG1P42857 185 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 NUP107P57740 925 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 RPL38P63173 70 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CHRNB3Q05901 458 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 PLD1Q13393 1074 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 MLC1Q15049 377 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 AAK1Q2M2I8 961 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 LRIT3Q3SXY7 679 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 ATXN7L2Q5T6C5 722 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 FAM9CQ8IZT9 166 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 EZH1Q92800 747 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 FAM162AQ96A26 154 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 COG8Q96MW5 612 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SH3GL1Q99961 368 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 ACPTQ9BZG2 426 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CHST8Q9H2A9 424 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 GPN2Q9H9Y4 310 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SIRT5Q9NXA8 310 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 KLQ9UEF7 1012 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CRLS1Q9UJA2 301 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 INTS6Q9UL03 887 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 INSL5Q9Y5Q6 135 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 COL4A3Q01955 1670 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 LRRK1Q38SD2 2015 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 WNT9AO14904 365 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SGTAO43765 313 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 DFNA5O60443 496 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 DEAF1O75398 565 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SLC25A14O95258 325 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 C8AP07357 584 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 HNRNPCP07910 306 aaKnown RBP eCLIP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 BMP1P13497 986 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 GJA1P17302 382 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CRHBPP24387 322 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 GSTM2P28161 218 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 POLR2IP36954 125 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 GNPDA1P46926 289 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 HSPA7P48741 367 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CLK1P49759 484 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 HNMTP50135 292 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 RAB39AQ14964 217 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 FAM98BQ52LJ0 330 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 DGKKQ5KSL6 1271 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CROCCQ5TZA2 2017 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 RETSATQ6NUM9 610 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CRTC1Q6UUV9 634 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 LINC00299Q6ZSB3 139 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 TPRG1Q6ZUI0 275 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CAMKMTQ7Z624 323 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 ADGRD2Q7Z7M1 963 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CROCCP3Q8IVE0 287 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SIX5Q8N196 739 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 CLDN19Q8N6F1 224 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 NAT16Q8N8M0 369 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 GPR26Q8NDV2 337 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 ITFG1Q8TB96 612 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 ASB11Q8WXH4 323 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 TMBIM1Q969X1 311 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 C12orf43Q96C57 262 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SLC32A1Q9H598 525 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 COQ3Q9NZJ6 369 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 TMEFF2Q9UIK5 374 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 ERVW-1Q9UQF0 538 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 EIF3LQ9Y262 564 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 U3KQV3 271 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 A0A1W2PQ67 120 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 K7ERQ8 282 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SCN2BO60939 215 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SH3BGRLO75368 114 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 C8GP07360 202 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 HTR1AP08908 422 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 LINC00271P0C7V0 271 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 PRPS2P11908 318 aa6.97□□□□□ -1.29
CTNNA1-244ENST00000627109 SHMT2P34897 504 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms