RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 FDXRP22570 491 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 CCND1P24385 295 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 RPA3P35244 121 aaPredicted RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 CARSP49589 748 aaKnown RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 AP1S2P56377 157 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 CKAP4Q07065 602 aaKnown RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 PDIA2Q13087 525 aaKnown RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 CUL1Q13616 776 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 DEFB109BQ30KR1 87 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 FAM45BPQ6NSW5 357 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 TCTN3Q6NUS6 607 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 ZNF605Q86T29 641 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 PALM2Q8IXS6 379 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 LRRC56Q8IYG6 542 aaPredicted RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 CPNE9Q8IYJ1 553 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 MYO1HQ8N1T3 1032 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 ZNF655Q8N720 491 aaPredicted RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 ENDOVQ8N8Q3 282 aaKnown RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 FBXO36Q8NEA4 188 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 FAM45AQ8TCE6 357 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 ZNF480Q8WV37 535 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 ZFYVE21Q9BQ24 234 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 SELENOSQ9BQE4 189 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 PLCD4Q9BRC7 762 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 SPRTNQ9H040 489 aaPredicted RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 SLC26A1Q9H2B4 701 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 WDR54Q9H977 334 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 MRPS30Q9NP92 439 aaKnown RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 PPANQ9NQ55 473 aaKnown RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 MAN2B2Q9Y2E5 1009 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 VWA7Q9Y334 891 aa11.93□□□□□ -0.5
LINC00963-217ENST00000624009 SPTAN1Q13813 2472 aaKnown RBP11.93□□□□□ -0.5
LINC00963-217ENST00000624009 CDC14CA4D256 554 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 MKRN2OSH3BPM6 223 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 TXNDC9O14530 226 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 DSCR3O14972 297 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 RAD51CO43502 376 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 CTSVO60911 334 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 KLF7O75840 302 aaPredicted RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 TSPAN12O95859 305 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 ENO2P09104 434 aaPredicted RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 EZRP15311 586 aaKnown RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 IMPA1P29218 277 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 RRADP55042 308 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 IL2P60568 153 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 FASTKQ14296 549 aaKnown RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 SSPNQ14714 243 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 DEFB110Q30KQ9 67 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 NKAIN1Q4KMZ8 207 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 ICE2Q659A1 982 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 ZNF425Q6IV72 752 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 LCN10Q6JVE6 187 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 MRPL14Q6P1L8 145 aaKnown RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 PRMT9Q6P2P2 845 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 TRMT10BQ6PF06 316 aaKnown RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 SYT10Q6XYQ8 523 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 UBE2R2Q712K3 238 aaPredicted RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 TAX1BP1Q86VP1 789 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 RAB43Q86YS6 212 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 TMEM102Q8N9M5 508 aaPredicted RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 TTC29Q8NA56 475 aaPredicted RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 C9orf43Q8TAL5 461 aaPredicted RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 MVB12AQ96EY5 273 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 CFAP36Q96G28 342 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 MIPEPQ99797 713 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 MCMBPQ9BTE3 642 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 DPH7Q9BTV6 452 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 FAM129AQ9BZQ8 928 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 TRIM31Q9BZY9 425 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 POPDC3Q9HBV1 291 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 CIDEBQ9UHD4 219 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 NXT1Q9UKK6 140 aaKnown RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 NOVA2Q9UNW9 492 aaKnown RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 SNX24Q9Y343 169 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 PCDHGB7Q9Y5F8 929 aa11.92□□□□□ -0.5
LINC00963-217ENST00000624009 PCDHGA9Q9Y5G4 932 aaKnown RBP11.92□□□□□ -0.5
LINC00963-217ENST00000624009 SCN2AQ99250 2005 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 FURINP09958 794 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 HIST1H2AGP0C0S8 130 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-217ENST00000624009 HIST1H2ADP20671 130 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 MCM3P25205 808 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 PSMB5P28074 263 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 CDKN2DP55273 166 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 PDAP1Q13442 181 aaKnown RBP11.91□□□□□ -0.5
LINC00963-217ENST00000624009 IL10RAQ13651 578 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 COL9A2Q14055 689 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-217ENST00000624009 PTCHD3Q3KNS1 767 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 RBM20Q5T481 1227 aaKnown RBP11.91□□□□□ -0.5
LINC00963-217ENST00000624009 ATP1A1-AS1Q5TC04 95 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 HECTD2Q5U5R9 776 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 GARNL3Q5VVW2 1013 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 PAQR3Q6TCH7 311 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 MED25Q71SY5 747 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 PIWIL4Q7Z3Z4 852 aaKnown RBP11.91□□□□□ -0.5
LINC00963-217ENST00000624009 ZC3HC1Q86WB0 502 aaKnown RBP11.91□□□□□ -0.5
LINC00963-217ENST00000624009 PAQR7Q86WK9 346 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 HPS6Q86YV9 775 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 ZBED8Q8IZ13 594 aa11.91□□□□□ -0.5
LINC00963-217ENST00000624009 C2orf73Q8N5S3 287 aaPredicted RBP11.91□□□□□ -0.5
LINC00963-217ENST00000624009 OR2Y1Q8NGV0 311 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms