RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 DHX58Q96C10 678 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 ZNF486Q96H40 463 aaPredicted RBP3.68□□□□□ -1.82
BRCA1-229ENST00000621897 C10orf90Q96M02 699 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 MS4A10Q96PG2 267 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 USP28Q96RU2 1077 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 SDF4Q9BRK5 362 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 THAP2Q9H0W7 228 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 SLC35C2Q9NQQ7 365 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 MAN2C1Q9NTJ4 1040 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 MTRRQ9UBK8 725 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 ADD3Q9UEY8 706 aaKnown RBP3.68□□□□□ -1.82
BRCA1-229ENST00000621897 TBK1Q9UHD2 729 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 STUB1Q9UNE7 303 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 TNNQ9UQP3 1299 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 KNSTRNQ9Y448 316 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 IKBKGQ9Y6K9 419 aa3.68□□□□□ -1.82
BRCA1-229ENST00000621897 C15orf61A6NNL5 157 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 ENO4A6NNW6 628 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 EPM2AB3EWF7 344 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 PI4K2BG5E9Z4 385 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 SOCS3O14543 225 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 MEIS2O14770 477 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 TSPAN1O60635 241 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 ENTPD3O75355 529 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 APOA4P06727 396 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 CCDC159P0C7I6 412 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 DARSP14868 501 aaKnown RBP3.67□□□□□ -1.82
BRCA1-229ENST00000621897 STMN1P16949 149 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 DESP17661 470 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 ALOX12P18054 663 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 ATP6V1E1P36543 226 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 ANP32AP39687 249 aaKnown RBP3.67□□□□□ -1.82
BRCA1-229ENST00000621897 SLC9A3P48764 834 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 CSRP3P50461 194 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 GSCP56915 257 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-229ENST00000621897 UBASH3AP57075 661 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 SLC8A3P57103 927 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 HNRNPKP61978 463 aaKnown RBP eCLIP3.67□□□□□ -1.82
BRCA1-229ENST00000621897 UBXN2AP68543 259 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 TNIP1Q15025 636 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 ODF4Q2M2E3 257 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 TAF1BQ53T94 588 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-229ENST00000621897 SYT14P1Q58G82 188 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 ZNF343Q6P1L6 599 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 TATDN1Q6P1N9 297 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 GPRIN3Q6ZVF9 776 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 MCM10Q7L590 875 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 IQCA1Q86XH1 822 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 CCAR2Q8N163 923 aaKnown RBP3.67□□□□□ -1.82
BRCA1-229ENST00000621897 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-229ENST00000621897 CCDC191Q8NCU4 936 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 SSMEM1Q8WWF3 244 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 SLCO2A1Q92959 643 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 SPDL1Q96EA4 605 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 TIGD1Q96MW7 591 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 ANP32EQ9BTT0 268 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 LRRC61Q9BV99 259 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 PITPNM3Q9BZ71 974 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 TRPV4Q9HBA0 871 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 SPHK2Q9NRA0 654 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 GKN1Q9NS71 199 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 FAM207AQ9NSI2 230 aaPredicted RBP3.67□□□□□ -1.82
BRCA1-229ENST00000621897 SPHK1Q9NYA1 384 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 ATP6V0A2Q9Y487 856 aa3.67□□□□□ -1.82
BRCA1-229ENST00000621897 A0A1W2PR80 420 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 hCG_1807616A0A1W2PRN6 198 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 RTCAO00442 366 aaKnown RBP3.66□□□□□ -1.82
BRCA1-229ENST00000621897 SEC24AO95486 1093 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 CSH1P0DML2 217 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 CSH2P0DML3 217 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 TLX1P31314 330 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-229ENST00000621897 HPDP32754 393 aaPredicted RBP3.66□□□□□ -1.82
BRCA1-229ENST00000621897 IFT88Q13099 833 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 NFATC2Q13469 925 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 HSP90AB3PQ58FF7 597 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 WLSQ5T9L3 541 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 KLHL10Q6JEL2 608 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 UNC5DQ6UXZ4 953 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 GALNTL5Q7Z4T8 443 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 GPRC5AQ8NFJ5 357 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 OR1L3Q8NH93 324 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 EXD1Q8NHP7 514 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 GTF3AQ92664 365 aaKnown RBP3.66□□□□□ -1.82
BRCA1-229ENST00000621897 SLC22A18Q96BI1 424 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 SPATA17Q96L03 361 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 FAM20AQ96MK3 541 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 NECTIN4Q96NY8 510 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 TXLNGYQ9BZA5 131 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 WWTR1Q9GZV5 400 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 EQTNQ9NQ60 294 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 COMMD8Q9NX08 183 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 NUDT4Q9NZJ9 180 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 OR6C2Q9NZP2 312 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 THEGQ9P2T0 379 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 VPS28Q9UK41 221 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 BLOC1S6Q9UL45 172 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 MOB4Q9Y3A3 225 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 RRP15Q9Y3B9 282 aaKnown RBP3.66□□□□□ -1.82
BRCA1-229ENST00000621897 CSAG2Q9Y5P2 127 aa3.66□□□□□ -1.82
BRCA1-229ENST00000621897 ZHX2Q9Y6X8 837 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms