RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 FOXK1P85037 733 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 GRSF1Q12849 480 aaKnown RBP eCLIP11.72□□□□□ -0.53
SRRT-215ENST00000614484 KLF10Q13118 480 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 C16orf46Q6P387 395 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 UNC5AQ6ZN44 842 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 ZBTB46Q86UZ6 589 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 FRMD1Q8N878 549 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 OR2A12Q8NGT7 310 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 TBC1D15Q8TC07 691 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 RAB7BQ96AH8 199 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 PRPF19Q9UMS4 504 aaKnown RBP11.72□□□□□ -0.53
SRRT-215ENST00000614484 KCTD3Q9Y597 815 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 GMPPBQ9Y5P6 360 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 MAU2Q9Y6X3 613 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 PCM1Q15154 2024 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 C7orf72A4D263 438 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 HMX3A6NHT5 357 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 DBX1A6NMT0 343 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 HACD1B0YJ81 288 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 TOP3BO95985 862 aaKnown RBP11.72□□□□□ -0.53
SRRT-215ENST00000614484 MMP2P08253 660 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 HNRNPLP14866 589 aaKnown RBP eCLIP11.72□□□□□ -0.53
SRRT-215ENST00000614484 HTR7P34969 479 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 ITGADQ13349 1161 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 C16orf89Q6UX73 402 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 MACC1Q6ZN28 852 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 BEND7Q8N7W2 519 aaPredicted RBP11.72□□□□□ -0.53
SRRT-215ENST00000614484 ARRDC2Q8TBH0 407 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 ACDQ96AP0 544 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 RAD51AP1Q96B01 352 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 IL12RB2Q99665 862 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 OSBPL11Q9BXB4 747 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 MROQ9BYG7 248 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 SEMA6AQ9H2E6 1030 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 SYNDIG1Q9H7V2 258 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 COQ10BQ9H8M1 238 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 TRIM39Q9HCM9 518 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 PAK5Q9P286 719 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 DAPK2Q9UIK4 370 aa11.72□□□□□ -0.53
SRRT-215ENST00000614484 NUP210Q8TEM1 1887 aaPredicted RBP11.72□□□□□ -0.53
SRRT-215ENST00000614484 A0A1W2PPW3 197 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 SYNDIG1LA6NDD5 238 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 GCATO75600 419 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 PTX3P26022 381 aaPredicted RBP11.71□□□□□ -0.53
SRRT-215ENST00000614484 CRHR1P34998 444 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 CAPZA2P47755 286 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 PSMD8P48556 350 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 RNF4P78317 190 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 PLIN5Q00G26 463 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 TRAF2Q12933 501 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 FRG1Q14331 258 aaKnown RBP11.71□□□□□ -0.53
SRRT-215ENST00000614484 SHQ1Q6PI26 577 aaKnown RBP11.71□□□□□ -0.53
SRRT-215ENST00000614484 DEFB119Q8N690 84 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 IL17RCQ8NAC3 791 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 HM13Q8TCT9 377 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 RLN3Q8WXF3 142 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 KLHL32Q96NJ5 620 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 TDRD1Q9BXT4 1180 aaKnown RBP11.71□□□□□ -0.53
SRRT-215ENST00000614484 OSGEPL1Q9H4B0 414 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 LMAN1LQ9HAT1 526 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 DNAJC28Q9NX36 388 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 RAI2Q9Y5P3 530 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 TEX264Q9Y6I9 313 aa11.71□□□□□ -0.53
SRRT-215ENST00000614484 A0A087WXM4 84 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 A0A0G2JPF8 293 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 HNRNPCL3B7ZW38 293 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 ERVH48-1M5A8F1 160 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 SLC7A4O43246 635 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 HNRNPCL4P0DMR1 293 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 COL9A1P20849 921 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 MGAT1P26572 445 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 HOXC12P31275 282 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 TRHRP34981 398 aaPredicted RBP11.71□□□□□ -0.54
SRRT-215ENST00000614484 SERPINB5P36952 375 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 BNIP3Q12983 259 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 HERC3Q15034 1050 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 TSSK4Q6SA08 328 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 MAVSQ7Z434 540 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 HMGB4Q8WW32 186 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 KLK6Q92876 244 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 MYOCQ99972 504 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 TPSD1Q9BZJ3 242 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 TINAGL1Q9GZM7 467 aaPredicted RBP11.71□□□□□ -0.54
SRRT-215ENST00000614484 MFSD1Q9H3U5 465 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 SMYD2Q9NRG4 433 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 OLAHQ9NV23 265 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 SLC17A6Q9P2U8 582 aa11.71□□□□□ -0.54
SRRT-215ENST00000614484 TSR3Q9UJK0 312 aaKnown RBP11.71□□□□□ -0.54
SRRT-215ENST00000614484 PRSS51A0A1B0GVH4 220 aa11.7□□□□□ -0.54
SRRT-215ENST00000614484 LINC00587B1AMM8 73 aa11.7□□□□□ -0.54
SRRT-215ENST00000614484 SYNCRIPO60506 623 aaKnown RBP11.7□□□□□ -0.54
SRRT-215ENST00000614484 RECKO95980 971 aa11.7□□□□□ -0.54
SRRT-215ENST00000614484 SERPINF2P08697 491 aa11.7□□□□□ -0.54
SRRT-215ENST00000614484 RPS17P08708 135 aaKnown RBP11.7□□□□□ -0.54
SRRT-215ENST00000614484 ZNF26P17031 533 aaPredicted RBP11.7□□□□□ -0.54
SRRT-215ENST00000614484 TARDBPQ13148 414 aaKnown RBP eCLIP11.7□□□□□ -0.54
SRRT-215ENST00000614484 TCEA2Q15560 299 aa11.7□□□□□ -0.54
SRRT-215ENST00000614484 MLF2Q15773 248 aaPredicted RBP11.7□□□□□ -0.54
SRRT-215ENST00000614484 TMEM196Q5HYL7 178 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms