RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 TRIM46Q7Z4K8 759 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 ACOT1Q86TX2 421 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 GALNT13Q8IUC8 556 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 SLC39A13Q96H72 371 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 RADILQ96JH8 1075 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 MEPEQ9NQ76 525 aaPredicted RBP8.58□□□□□ -1.04
TTC28-208ENST00000612946 ZNF510Q9Y2H8 683 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 TMEM98Q9Y2Y6 226 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 HOXA2O43364 376 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 ZNF675Q8TD23 568 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 E9PAM4 449 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 CDRT1O95170 752 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 PRPS1L1P21108 318 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 ACTA2P62736 377 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 ACTG2P63267 376 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 GRM2Q14416 872 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 FAM174BQ3ZCQ3 159 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 COPS5Q92905 334 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 SEZ6LQ9BYH1 1024 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 TMEM185BQ9H7F4 350 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 SIAEQ9HAT2 523 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 EMC7Q9NPA0 242 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 SCN2BO60939 215 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 ALX3O95076 343 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 PDYNP01213 254 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 TFPTP0C1Z6 253 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 STAG3L1P0CL83 205 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 SERPINF1P36955 418 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 CXCR4P61073 352 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 VLDLRP98155 873 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 SPIN4Q56A73 249 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 RAD9AQ99638 391 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 TXN2Q99757 166 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 APC2O95996 2303 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 COL3A1P02461 1466 aaPredicted RBP8.58□□□□□ -1.04
TTC28-208ENST00000612946 GNALP38405 381 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 TGFB2P61812 414 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 TMEM132BQ14DG7 1078 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 PROX2Q3B8N5 592 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 UGT3A2Q3SY77 523 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 MAPK15Q8TD08 544 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 PIGKQ92643 395 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 KXD1Q9BQD3 176 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 DPCDQ9BVM2 203 aaPredicted RBP8.58□□□□□ -1.04
TTC28-208ENST00000612946 SLC27A6Q9Y2P4 619 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 PCDHB3Q9Y5E6 796 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 A0A0D9SG52 128 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 GABRDO14764 452 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 SOX9P48436 509 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 MANFP55145 182 aaKnown RBP8.58□□□□□ -1.04
TTC28-208ENST00000612946 ABHD18Q0P651 414 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 GLB1LQ6UWU2 654 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 C3P1Q6ZMU1 363 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 TPGS1Q6ZTW0 290 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 RFPL4BQ6ZWI9 263 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 ACOT13Q9NPJ3 140 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 BHMG1C9JSJ3 638 aaPredicted RBP8.58□□□□□ -1.04
TTC28-208ENST00000612946 SLC25A27O95847 323 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 TSPYL5Q86VY4 417 aaPredicted RBP8.58□□□□□ -1.04
TTC28-208ENST00000612946 PYURFQ96I23 114 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 CPQQ9Y646 472 aa8.58□□□□□ -1.04
TTC28-208ENST00000612946 ASTN1O14525 1302 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 RGS9O75916 674 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 ERCC1P07992 297 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 GTF2BQ00403 316 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 BCL2A1Q16548 175 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 LACC1Q8IV20 430 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 CHDHQ8NE62 594 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 DHRS9Q9BPW9 319 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 MRPL45Q9BRJ2 306 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 GATA5Q9BWX5 397 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 ASPNQ9BXN1 380 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 TMLHEQ9NVH6 421 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 RPP40O75818 363 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 RCBTB2O95199 551 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 CSF1RP07333 972 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 SUPT20HL2P0C7V6 817 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 YBX3P16989 372 aaKnown RBP eCLIP8.57□□□□□ -1.04
TTC28-208ENST00000612946 SCNN1GP51170 649 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 RGS8P57771 180 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 RANP62826 216 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 KCNC4Q03721 635 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 ZNF169Q14929 603 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 KIAA0930Q6ICG6 404 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 SLC16A9Q7RTY1 509 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 SCUBE3Q8IX30 993 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 CANT1Q8WVQ1 401 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 C2orf49Q9BVC5 232 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 TFB2MQ9H5Q4 396 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 ICKQ9UPZ9 632 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 HCN4Q9Y3Q4 1203 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 U3KQV3 271 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 M0R129 80 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 CDK1P06493 297 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 GIMD1P0DJR0 217 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 VAMP1P23763 118 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 C14orf28Q4W4Y0 310 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 ZNF709Q8N972 641 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 OR10A6Q8NH74 314 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 SNAPC3Q92966 411 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms