RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 CCDC189A1A4V9 331 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 OR2A25A4D2G3 310 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 ZNF891A8MT65 544 aaPredicted RBP13.71□□□□□ -0.21
HDDC2-209ENST00000609477 MEN1O00255 615 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 ZSCAN9O15535 394 aaPredicted RBP13.71□□□□□ -0.21
HDDC2-209ENST00000609477 ZNF500O60304 480 aaPredicted RBP13.71□□□□□ -0.21
HDDC2-209ENST00000609477 SNRNP200O75643 2136 aaKnown RBP13.71□□□□□ -0.21
HDDC2-209ENST00000609477 WISP3O95389 354 aaPredicted RBP13.71□□□□□ -0.21
HDDC2-209ENST00000609477 ITGB2P05107 769 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 SAT1P21673 171 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 RORAP35398 523 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 RAB10P61026 200 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 ATP6V0D1P61421 351 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 ZKSCAN8Q15776 578 aaPredicted RBP13.71□□□□□ -0.21
HDDC2-209ENST00000609477 ARHGAP40Q5TG30 622 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 AGTRAPQ6RW13 159 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 SUSD1Q6UWL2 747 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 SBSNQ6UWP8 590 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 TMEM207Q6UWW9 146 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 VASH2Q86V25 355 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 MCATQ8IVS2 390 aaKnown RBP13.71□□□□□ -0.21
HDDC2-209ENST00000609477 CEP97Q8IW35 865 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 DSELQ8IZU8 1212 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 PROKR1Q8TCW9 393 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 CLIP3Q96DZ5 547 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 CATSPER2Q96P56 530 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 PLCD4Q9BRC7 762 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 DPH7Q9BTV6 452 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 WDR70Q9NW82 654 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 ARL15Q9NXU5 204 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 NINJ2Q9NZG7 142 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 TAC3Q9UHF0 121 aa13.71□□□□□ -0.21
HDDC2-209ENST00000609477 FITM1A5D6W6 292 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 KRT87PA6NCN2 255 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 ERVH48-1M5A8F1 160 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 TERTO14746 1132 aaKnown RBP13.7□□□□□ -0.22
HDDC2-209ENST00000609477 ZNF749O43361 778 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 PIAS1O75925 651 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 RAB40ALP0C0E4 278 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 EZRP15311 586 aaKnown RBP13.7□□□□□ -0.22
HDDC2-209ENST00000609477 TCN2P20062 427 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 AGXTP21549 392 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 PSMB5P28074 263 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 CRABP2P29373 138 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 DLSTP36957 453 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 HNMTP50135 292 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 EMP3P54852 163 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 RPS15P62841 145 aaKnown RBP13.7□□□□□ -0.22
HDDC2-209ENST00000609477 GRM7Q14831 915 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 PHKG1Q16816 387 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 PPP1R3AQ16821 1122 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 FAM214AQ32MH5 1076 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 CDKL4Q5MAI5 379 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 THEMIS2Q5TEJ8 643 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 ZNF425Q6IV72 752 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 CAPN13Q6MZZ7 669 aaPredicted RBP13.7□□□□□ -0.22
HDDC2-209ENST00000609477 RNF44Q7L0R7 432 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.7□□□□□ -0.22
HDDC2-209ENST00000609477 FBXL8Q96CD0 374 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 UBXN10Q96LJ8 280 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 UBL7Q96S82 380 aaPredicted RBP13.7□□□□□ -0.22
HDDC2-209ENST00000609477 ZFYVE21Q9BQ24 234 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 HAUS8Q9BT25 410 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 NDC1Q9BTX1 674 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 SGPP1Q9BX95 441 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 CDC42EP4Q9H3Q1 356 aaKnown RBP13.7□□□□□ -0.22
HDDC2-209ENST00000609477 PCMTD2Q9NV79 361 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 TMEM184CQ9NVA4 438 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 CTNNAL1Q9UBT7 734 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 CROTQ9UKG9 612 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 OARD1Q9Y530 152 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 CHD6Q8TD26 2715 aa13.7□□□□□ -0.22
HDDC2-209ENST00000609477 TXNDC9O14530 226 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 ANXA5P08758 320 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 TBPL1P62380 186 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 GPS2Q13227 327 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 TSTA3Q13630 321 aaPredicted RBP13.69□□□□□ -0.22
HDDC2-209ENST00000609477 PRAMEF13Q5VWM6 474 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 LCTLQ6UWM7 567 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 TRMT10CQ7L0Y3 403 aaKnown RBP13.69□□□□□ -0.22
HDDC2-209ENST00000609477 PAQR7Q86WK9 346 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 FAM20CQ8IXL6 584 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 SLC38A9Q8NBW4 561 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 PPFIBP2Q8ND30 876 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 OR56A3Q8NH54 315 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 ANKRD49Q8WVL7 239 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 MR1Q95460 341 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 CRELD1Q96HD1 420 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 SELENOSQ9BQE4 189 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 DHRS4Q9BTZ2 278 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 ACAT2Q9BWD1 397 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 NLNQ9BYT8 704 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 SPRTNQ9H040 489 aaPredicted RBP13.69□□□□□ -0.22
HDDC2-209ENST00000609477 TXLNGQ9NUQ3 528 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 NFU1Q9UMS0 254 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 KLHL20Q9Y2M5 609 aa13.69□□□□□ -0.22
HDDC2-209ENST00000609477 A0A087WUV0 522 aaPredicted RBP13.68□□□□□ -0.22
HDDC2-209ENST00000609477 IGKV1-8A0A0C4DH67 115 aa13.68□□□□□ -0.22
HDDC2-209ENST00000609477 TK2O00142 265 aa13.68□□□□□ -0.22
HDDC2-209ENST00000609477 HCRTR1O43613 425 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms