RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 MID2Q9UJV3 735 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 PCTPQ9UKL6 214 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 TMCO1Q9UM00 188 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 SLC22A14Q9Y267 594 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 KLHL20Q9Y2M5 609 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 ENTPD2Q9Y5L3 495 aa7.41□□□□□ -1.22
MSH6-211ENST00000606499 ASXL3Q9C0F0 2248 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 IGHV5-51A0A0C4DH38 117 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 IGKV1-8A0A0C4DH67 115 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 A0A0J9YY10 115 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 A8MU76 341 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 E7EQ34 232 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 AGRPO00253 132 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 MATN2O00339 956 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 ZW10O43264 779 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 PRAMEF10O60809 474 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 RASSF9O75901 435 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 C9P02748 559 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 FTH1P19P0C7X4 201 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 DHRS4L1P0CG22 281 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 CDH1P12830 882 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 ST6GAL1P15907 406 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 NPPBP16860 134 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 MAGP20916 626 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 CDH3P22223 829 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 CCND1P24385 295 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 CCR10P46092 362 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 ATP1A2P50993 1020 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 PDX1P52945 283 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 SLC18A1P54219 525 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 PRKAA2P54646 552 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 NAGLUP54802 743 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 INSM1Q01101 510 aaPredicted RBP7.4□□□□□ -1.22
MSH6-211ENST00000606499 CDC16Q13042 620 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 GPS2Q13227 327 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 ILKQ13418 452 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 SQSTM1Q13501 440 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 SPIDRQ14159 915 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 PCBP2Q15366 365 aaKnown RBP eCLIP7.4□□□□□ -1.221e-7■■■■■ 32.2
MSH6-211ENST00000606499 PDK4Q16654 411 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 SLC5A12Q1EHB4 618 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 UNC50Q53HI1 259 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 CATSPEREQ5SY80 951 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 LIPMQ5VYY2 423 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 KIAA1614Q5VZ46 1190 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 CES4AQ5XG92 561 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 FAM219BQ5XKK7 198 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 ICE2Q659A1 982 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 LCTLQ6UWM7 567 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 GOLGA7Q7Z5G4 137 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 RAB44Q7Z6P3 723 aaPredicted RBP7.4□□□□□ -1.22
MSH6-211ENST00000606499 C17orf64Q86WR6 236 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 PLXDC1Q8IUK5 500 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 SLC22A9Q8IVM8 553 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 SLITRK4Q8IW52 837 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 RCBTB1Q8NDN9 531 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 ZNF483Q8TF39 744 aaPredicted RBP7.4□□□□□ -1.22
MSH6-211ENST00000606499 NEIL2Q969S2 332 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 SLC22A18Q96BI1 424 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 CCDC126Q96EE4 140 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 L3HYPDHQ96EM0 354 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 ZDHHC12Q96GR4 267 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 PRR11Q96HE9 360 aaPredicted RBP7.4□□□□□ -1.22
MSH6-211ENST00000606499 CCDC74BQ96LY2 380 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 MAP3K3Q99759 626 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 RAB33BQ9H082 229 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 GSTO2Q9H4Y5 243 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 ZBTB26Q9HCK0 441 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 SEMA4BQ9NPR2 832 aaPredicted RBP7.4□□□□□ -1.22
MSH6-211ENST00000606499 EPHA6Q9UF33 1036 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 DYRK1BQ9Y463 629 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 ANGPTL3Q9Y5C1 460 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 PCDHB11Q9Y5F2 797 aa7.4□□□□□ -1.22
MSH6-211ENST00000606499 TNPO3Q9Y5L0 923 aaKnown RBP7.4□□□□□ -1.22
MSH6-211ENST00000606499 GOLGA4Q13439 2230 aaKnown RBP7.4□□□□□ -1.23
MSH6-211ENST00000606499 CEP295Q9C0D2 2601 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 PCM1Q15154 2024 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 PTPRBP23467 1997 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 IGHV5-10-1A0A0J9YXX1 117 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 A0A1B0GTL3 188 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 DCDC2BA2VCK2 349 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 TLCD2A6NGC4 264 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 SLC9B1P1A6NJY1 282 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 PPP6CO00743 305 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 OR7A17O14581 309 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 HAT1O14929 419 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 PRAMEF4O60810 478 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 SUPT7LO94864 414 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 DKK1O94907 266 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 CCNDBP1O95273 360 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 KCNK5O95279 499 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 THRAP10827 490 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 FGF3P11487 239 aaPredicted RBP7.39□□□□□ -1.23
MSH6-211ENST00000606499 CEACAM1P13688 526 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 CHN1P15882 459 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 EPB42P16452 691 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 IMPDH1P20839 514 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 BGNP21810 368 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 CMPK1P30085 196 aa7.39□□□□□ -1.23
MSH6-211ENST00000606499 ARRB2P32121 409 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms