RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 NPDC1Q9NQX5 325 aaPredicted RBP11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 C14orf105Q9NVL8 296 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ANKRD10Q9NXR5 420 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 COQ3Q9NZJ6 369 aa11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ZC3H7BQ9UGR2 993 aaKnown RBP11.18□□□□□ -0.62
PDLIM1P1-201ENST00000604187 LOC102723996A0A087X1L8 192 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 A0A0J9YVX5 310 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 RCCD1A6NED2 376 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 NRP2O60462 931 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ZRANB2O95218 330 aaKnown RBP eCLIP11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TSPAN12O95859 305 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ERVK-10P10266 1014 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ST13P50502 369 aaKnown RBP11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TUBA3CQ13748 450 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 GRB7Q14451 532 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 MUM1Q2TAK8 710 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ITPRIPL1Q6GPH6 555 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TUBA3EQ6PEY2 450 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SIAH3Q8IW03 269 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CHERPQ8IWX8 916 aaKnown RBP11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 MDS2Q8NDY4 140 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 OR2L8Q8NGY9 312 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CABS1Q96KC9 395 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FRMD6Q96NE9 622 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SIGLEC12Q96PQ1 595 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 MIPEPQ99797 713 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ZNF559Q9BR84 538 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 C10orf88Q9H8K7 445 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DDX56Q9NY93 547 aaKnown RBP11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 IMPACTQ9P2X3 320 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 LUC7L2Q9Y383 392 aaKnown RBP11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 HYOU1Q9Y4L1 999 aa11.17□□□□□ -0.62
PDLIM1P1-201ENST00000604187 NKX2-6A6NCS4 301 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ASPDHA6ND91 283 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FAM90A27PA6NNH2 459 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FOXO6A8MYZ6 492 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TARM1B6A8C7 271 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PRRG2O14669 202 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 RASGRF2O14827 1237 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PRPF4O43172 522 aaKnown RBP eCLIP11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ASNA1O43681 348 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SEC24DO94855 1032 aaPredicted RBP11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ICAM2P13598 275 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PSMB4P28070 264 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PSMB5P28074 263 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 EEF1DP29692 281 aaKnown RBP11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ZBED6P86452 979 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PLOD1Q02809 727 aaPredicted RBP11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FOXD4Q12950 439 aaPredicted RBP11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 OR1C1Q15619 314 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TAZQ16635 292 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ACER2Q5QJU3 275 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DENND5AQ6IQ26 1287 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FGD2Q7Z6J4 655 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DCUN1D3Q8IWE4 304 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 EID3Q8N140 333 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 GHDCQ8N2G8 530 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TAB3Q8N5C8 712 aaPredicted RBP11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CFAP61Q8NHU2 1237 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SLC35G2Q8TBE7 412 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ZUFSPQ96AP4 578 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 IMMP1LQ96LU5 166 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 C19orf43Q9BQ61 176 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TUBB6Q9BUF5 446 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CCM2LQ9NUG4 571 aaPredicted RBP11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CDC14AQ9UNH5 594 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 AAR2Q9Y312 384 aaKnown RBP11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 DOCK10Q96BY6 2186 aa11.16□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ABCA4P78363 2273 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 IGHV3-20A0A0C4DH32 117 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 HACD1B0YJ81 288 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 H7C0S8 307 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 QSOX1O00391 747 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 RPN2P04844 631 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TMEM253P0C7T8 217 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 C8orf89P0DMQ9 161 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ZNF24P17028 368 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 RBL1P28749 1068 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 EFNA3P52797 238 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 FOLH1Q04609 750 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TYRO3Q06418 890 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 HSPA14Q0VDF9 509 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 MYBPHQ13203 477 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SPARCL1Q14515 664 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ITIH4Q14624 930 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PRTGQ2VWP7 1150 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SPINK14Q6IE38 97 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TMEM205Q6UW68 189 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 PACS1Q6VY07 963 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CEP128Q6ZU80 1094 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 RNF44Q7L0R7 432 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 VRK3Q8IV63 474 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 CCDC50Q8IVM0 306 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 ZC3H7AQ8IWR0 971 aaKnown RBP11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SLC22A15Q8IZD6 547 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 AMER3Q8N944 861 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 SCMH1Q96GD3 660 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 TBL1YQ9BQ87 522 aa11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 UTP23Q9BRU9 249 aaKnown RBP11.15□□□□□ -0.62
PDLIM1P1-201ENST00000604187 NAT10Q9H0A0 1025 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms