RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 GPC2Q8N158 579 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 MKRN2Q9H000 416 aaKnown RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 MRPS33Q9Y291 106 aaKnown RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 MYPNQ86TC9 1320 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF705GA8MUZ8 300 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 PEPDP12955 493 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 OR1D2P34982 312 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 DUSP4Q13115 394 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 SP140Q13342 867 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 TCTEX1D2Q8WW35 142 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 HSD17B14Q9BPX1 270 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 FAM53CQ9NYF3 392 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF254O75437 659 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 RBM34P42696 430 aaKnown RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 MECP2P51608 486 aaKnown RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 IRF9Q00978 393 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 FAM174BQ3ZCQ3 159 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 FAM46CQ5VWP2 391 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 IFNL1Q8IU54 200 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 BTN2A3PQ96KV6 586 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 KXD1Q9BQD3 176 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ARFGEF2Q9Y6D5 1785 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 BCL9O00512 1426 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 OR2AG2A6NM03 316 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 WNT7AO00755 349 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 COQ9O75208 318 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 C2P06681 752 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 RGS8P57771 180 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 CACNG1Q06432 222 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 GALEQ14376 348 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 LAPTM4AQ15012 233 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ALG1LQ6GMV1 187 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 C6orf89Q6UWU4 347 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 PLD5Q8N7P1 536 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 PSD4Q8NDX1 1056 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 FTHL17Q9BXU8 183 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 HMX1Q9NP08 348 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 PCDHAC2Q9Y5I4 1007 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ATRNO75882 1429 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 RFPL1O75677 317 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 RYKP34925 604 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 DEFA6Q01524 100 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 HSPB3Q12988 150 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 LCP2Q13094 533 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 PPTC7Q8NI37 304 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 PIGXQ8TBF5 258 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ANKHQ9HCJ1 492 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 UBIAD1Q9Y5Z9 338 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 FAM237AA0A1B0GTK4 181 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 NT5C1B-RDH14C9J2C7 533 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 SCELO95171 688 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 RAP2AP10114 183 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 CDH5P33151 784 aaPredicted RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 RGS6P49758 472 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 LRRC66Q68CR7 880 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 FSTL4Q6MZW2 842 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ARSKQ6UWY0 536 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 CRYBG2Q8N1P7 616 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 FAM109AQ8N4B1 249 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 MFSD8Q8NHS3 518 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 SNX33Q8WV41 574 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 DHX33Q9H6R0 707 aaKnown RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 MSRAQ9UJ68 235 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 NUAK1O60285 661 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 GCATO75600 419 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 HOXB6P17509 224 aaKnown RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 GNALP38405 381 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 EVX2Q03828 476 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 DCDC5Q6ZRR9 648 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 DEFB132Q7Z7B7 95 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 CREB3L1Q96BA8 519 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 FGFBP2Q9BYJ0 223 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 PLEKHA1Q9HB21 404 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 A8MUA0 341 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 CLDN9O95484 217 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 DNASE1P24855 282 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 TAF10Q12962 218 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 MSANTD2Q6P1R3 559 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 SLC26A9Q7LBE3 791 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF598Q86UK7 904 aaKnown RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 MON1AQ86VX9 555 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ACBD4Q8NC06 268 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 ZMIZ2Q8NF64 920 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 CNIH3Q8TBE1 160 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 DDX1Q92499 740 aaKnown RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 AGAP2Q99490 1192 aa8.51□□□□□ -1.05
CSMD1-216ENST00000602557 YTHDF1Q9BYJ9 559 aaKnown RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 PARP4Q9UKK3 1724 aaKnown RBP8.51□□□□□ -1.05
CSMD1-216ENST00000602557 SSX4O60224 188 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 PROS1P07225 676 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 GNAZP19086 355 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 FADDQ13158 208 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF425Q6IV72 752 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 DCLRE1AQ6PJP8 1040 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 XYLT1Q86Y38 959 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ZNF420Q8TAQ5 688 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-216ENST00000602557 TMEM109Q9BVC6 243 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 ARL6Q9H0F7 186 aa8.5□□□□□ -1.05
CSMD1-216ENST00000602557 GSKIPQ9P0R6 139 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms