RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 RNF165Q6ZSG1 346 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 LRRC37BQ96QE4 947 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 TUBB1Q9H4B7 451 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 ELOVL6Q9H5J4 265 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 C11orf16Q9NQ32 467 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 UCKL1Q9NWZ5 548 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 TRIM33Q9UPN9 1127 aa21.8■■□□□ 1.08
IRF3-228ENST00000601291 KCNE1BA0A087WTH5 132 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 YKT6O15498 198 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 DFNA5O60443 496 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 PRAMEF4O60810 478 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 CCNDBP1O95273 360 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 LINC00032P0C843 101 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 C1GALT1C1LP0DN25 315 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 LAPTM5Q13571 262 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 E2F2Q14209 437 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 ZRSR2Q15696 482 aaKnown RBP21.79■■□□□ 1.08
IRF3-228ENST00000601291 ZNF423Q2M1K9 1284 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 TCHHL1Q5QJ38 904 aaPredicted RBP21.79■■□□□ 1.08
IRF3-228ENST00000601291 PRAMEF9Q5VWM5 478 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 FAM219BQ5XKK7 198 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 NXPE4Q6UWF7 544 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 ALYREFQ86V81 257 aaKnown RBP21.79■■□□□ 1.08
IRF3-228ENST00000601291 SFTPA2Q8IWL1 248 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 CEP70Q8NHQ1 597 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 ACTRT2Q8TDY3 377 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 SLC22A18Q96BI1 424 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 WDR34Q96EX3 536 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 OR52B2Q96RD2 323 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 RIC8BQ9NVN3 520 aa21.79■■□□□ 1.08
IRF3-228ENST00000601291 MANBAO00462 879 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 CCDC22O60826 627 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 CHRM5P08912 532 aaPredicted RBP21.78■■□□□ 1.08
IRF3-228ENST00000601291 CDH1P12830 882 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 PSMB5P28074 263 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 FASLGP48023 281 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 IFT88Q13099 833 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 TUBB3Q13509 450 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 HIST2H2ACQ16777 129 aaPredicted RBP21.78■■□□□ 1.08
IRF3-228ENST00000601291 LSM12Q3MHD2 195 aaKnown RBP21.78■■□□□ 1.08
IRF3-228ENST00000601291 CATSPEREQ5SY80 951 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 METTL21CQ5VZV1 264 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 ICE2Q659A1 982 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 HIST2H2AA3Q6FI13 130 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 ZC3H14Q6PJT7 736 aaKnown RBP21.78■■□□□ 1.08
IRF3-228ENST00000601291 TMEM26Q6ZUK4 368 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 REPS1Q96D71 796 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 LOXL4Q96JB6 756 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 PELI2Q9HAT8 420 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 ZNF490Q9ULM2 529 aaPredicted RBP21.78■■□□□ 1.08
IRF3-228ENST00000601291 SLC6A14Q9UN76 642 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 SH2B3Q9UQQ2 575 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 H0YIV9 168 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 NOBOXO60393 691 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 CD22P20273 847 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 VARSP26640 1264 aaKnown RBP21.78■■□□□ 1.08
IRF3-228ENST00000601291 EPHA8P29322 1005 aaPredicted RBP21.78■■□□□ 1.08
IRF3-228ENST00000601291 HTR6P50406 440 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 MAZP56270 477 aaKnown RBP21.78■■□□□ 1.08
IRF3-228ENST00000601291 ABATP80404 500 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 ZNF33BQ06732 778 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 BNIP3Q12983 259 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 LPAL2Q16609 132 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 ZSCAN26Q16670 478 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 XKR7Q5GH72 579 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 OGFOD3Q6PK18 319 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 TRPM8Q7Z2W7 1104 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 MTDHQ86UE4 582 aaKnown RBP21.78■■□□□ 1.08
IRF3-228ENST00000601291 ARL14Q8N4G2 192 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 OR2A1Q8NGT9 310 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 SELENOMQ8WWX9 145 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 TUBGCP3Q96CW5 907 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.78■■□□□ 1.08
IRF3-228ENST00000601291 CAPN10Q9HC96 672 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 RAB23Q9ULC3 237 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 PCDHGA11Q9Y5H2 935 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 PTGDR2Q9Y5Y4 395 aa21.78■■□□□ 1.08
IRF3-228ENST00000601291 A0A1B0GTQ1 180 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 ATP6AP2A0A1C7CYW4 349 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 PIPSLA2A3N6 862 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 ISM1B1AKI9 464 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 E9PBE3 544 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 KLHL41O60662 606 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 ATP6AP2O75787 350 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 SERPINA6P08185 405 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 PRDX1Q06830 199 aaKnown RBP21.77■■□□□ 1.08
IRF3-228ENST00000601291 SLBPQ14493 270 aaKnown RBP eCLIP21.77■■□□□ 1.08
IRF3-228ENST00000601291 KIR2DS3Q14952 304 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 ABRAXAS2Q15018 415 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 SHBQ15464 509 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 HLA-BQ31612 363 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 TRIM61Q5EBN2 209 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 C6orf132Q5T0Z8 1188 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.77■■□□□ 1.08
IRF3-228ENST00000601291 FRG2Q64ET8 278 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 MED27Q6P2C8 311 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 SLC23A3Q6PIS1 610 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 ADGRF3Q8IZF5 1079 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 KRT78Q8N1N4 520 aa21.77■■□□□ 1.08
IRF3-228ENST00000601291 USP7Q93009 1102 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms