RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 NCSTNQ92542 709 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 ZDHHC12Q96GR4 267 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 NSUN5Q96P11 429 aaKnown RBP13.84□□□□□ -0.19
UPF1-211ENST00000600868 CD180Q99467 661 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 DPYSL5Q9BPU6 564 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 TRMOQ9BU70 441 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 ACAT2Q9BWD1 397 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 ABCG4Q9H172 646 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 GSTO2Q9H4Y5 243 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 ABCF3Q9NUQ8 709 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 DYRK1BQ9Y463 629 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 FAM186AA6NE01 2351 aa13.84□□□□□ -0.19
UPF1-211ENST00000600868 A0A1W2PQM1 296 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 NTN3O00634 580 aaPredicted RBP13.83□□□□□ -0.2
UPF1-211ENST00000600868 TM4SF5O14894 197 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 CAPN5O15484 640 aaPredicted RBP13.83□□□□□ -0.2
UPF1-211ENST00000600868 CPNE6O95741 557 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 MLYCDO95822 493 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 C9P02748 559 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 RPLP0P05388 317 aaKnown RBP13.83□□□□□ -0.2
UPF1-211ENST00000600868 GNAZP19086 355 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 BGNP21810 368 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 HRH2P25021 359 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 CMPK1P30085 196 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 CSF2RBP32927 897 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 PPM1FP49593 454 aaPredicted RBP13.83□□□□□ -0.2
UPF1-211ENST00000600868 GALNT1Q10472 559 aaPredicted RBP13.83□□□□□ -0.2
UPF1-211ENST00000600868 TRIP6Q15654 476 aaKnown RBP13.83□□□□□ -0.2
UPF1-211ENST00000600868 IRGCQ6NXR0 463 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 ZCCHC23Q6ZST2 131 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 RPS27LQ71UM5 84 aaKnown RBP13.83□□□□□ -0.2
UPF1-211ENST00000600868 CARFQ8N187 725 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 PPP1R14CQ8TAE6 165 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 SLC5A11Q8WWX8 675 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 MOCOSQ96EN8 888 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 DRC3Q9H069 523 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 MANSC1Q9H8J5 431 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 IPPKQ9H8X2 491 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 ZBTB26Q9HCK0 441 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 MRPS30Q9NP92 439 aaKnown RBP13.83□□□□□ -0.2
UPF1-211ENST00000600868 ACSS2Q9NR19 701 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 STK38LQ9Y2H1 464 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 PCDHGA1Q9Y5H4 931 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 KLK4Q9Y5K2 254 aa13.83□□□□□ -0.2
UPF1-211ENST00000600868 MN1Q10571 1320 aaPredicted RBP13.83□□□□□ -0.2
UPF1-211ENST00000600868 GVINP1Q7Z2Y8 2422 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 A0A0J9YY10 115 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 TLCD2A6NGC4 264 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 TMEM114B3SHH9 223 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 OR7A17O14581 309 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 SLC30A4O14863 429 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 KLF11O14901 512 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 CLGNO14967 610 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 UGDHO60701 494 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 CDK4P11802 303 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 CASP2P42575 452 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 CDH13P55290 713 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 GFERP55789 205 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 PPP1CAP62136 330 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 E2F1Q01094 437 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 LCP2Q13094 533 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 STX3Q13277 289 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 E2F2Q14209 437 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 RCN2Q14257 317 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 NAA25Q14CX7 972 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 KIAA1614Q5VZ46 1190 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 CES4AQ5XG92 561 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 ATG9BQ674R7 924 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 ATG16L1Q676U5 607 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 TMEM71Q6P5X7 295 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 NXPE4Q6UWF7 544 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 USP53Q70EK8 1073 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 DEFB124Q8NES8 71 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 ABHD11Q8NFV4 315 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 OR4D9Q8NGE8 314 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 TRPC4APQ8TEL6 797 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 CKAP2Q8WWK9 683 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 ZNF75CPQ92670 426 aaPredicted RBP13.82□□□□□ -0.2
UPF1-211ENST00000600868 NEIL2Q969S2 332 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 WDR34Q96EX3 536 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 MAGEB18Q96M61 343 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 GFM1Q96RP9 751 aaKnown RBP13.82□□□□□ -0.2
UPF1-211ENST00000600868 ZNF382Q96SR6 550 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 NTMT1Q9BV86 223 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 SEMA6CQ9H3T2 930 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 EHD1Q9H4M9 534 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 NOL11Q9H8H0 719 aaKnown RBP13.82□□□□□ -0.2
UPF1-211ENST00000600868 SEMA4BQ9NPR2 832 aaPredicted RBP13.82□□□□□ -0.2
UPF1-211ENST00000600868 C1GALT1Q9NS00 363 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 SEMA5BQ9P283 1151 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 PDP2Q9P2J9 529 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 ANKMY1Q9P2S6 941 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 SH2B3Q9UQQ2 575 aa13.82□□□□□ -0.2
UPF1-211ENST00000600868 IGKV1-8A0A0C4DH67 115 aa13.81□□□□□ -0.2
UPF1-211ENST00000600868 E7EQ34 232 aa13.81□□□□□ -0.2
UPF1-211ENST00000600868 RFPL3O75679 317 aa13.81□□□□□ -0.2
UPF1-211ENST00000600868 SNUPNO95149 360 aaKnown RBP13.81□□□□□ -0.2
UPF1-211ENST00000600868 OTCP00480 354 aa13.81□□□□□ -0.2
UPF1-211ENST00000600868 CDH1P12830 882 aa13.81□□□□□ -0.2
UPF1-211ENST00000600868 HOXB3P14651 431 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms