RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	ATP6V0D1	P61421	351 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	HSD11B2	P80365	405 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	ARHGAP19	Q14CB8	494 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	RTP5	Q14D33	572 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	SLC5A12	Q1EHB4	618 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	TMEM164	Q5U3C3	297 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	HHAT	Q5VTY9	493 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	CPLX4	Q7Z7G2	160 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	LSMEM2	Q8N112	164 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	C19orf47	Q8N9M1	422 aa	Known RBP	19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	ZNF473	Q8WTR7	871 aa	Known RBP	19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	KCTD4	Q8WVF5	259 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	N4BP2L2	Q92802	583 aa	Predicted RBP	19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	USP7	Q93009	1102 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	RNF31	Q96EP0	1072 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	TSNARE1	Q96NA8	513 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	OR6C1	Q96RD1	312 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	IQCG	Q9H095	443 aa	Known RBP	19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	ATG10	Q9H0Y0	220 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	CCDC177	Q9NQR7	707 aa	Predicted RBP	19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	TAC3	Q9UHF0	121 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	RNF112	Q9ULX5	631 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	IGF2R	P11717	2491 aa		19.39	■□□□□ 0.69
IRF3-221	ENST00000598808	SPAG7	O75391	227 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	ALDOA	P04075	364 aa	Known RBP	19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	S100B	P04271	92 aa	Predicted RBP	19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	C2	P06681	752 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	LTA4H	P09960	611 aa	Known RBP	19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	CD1D	P15813	335 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	IMPA1	P29218	277 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	CCT5	P48643	541 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	SEC24C	P53992	1094 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	AP1S2	P56377	157 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	TBPL1	P62380	186 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	TUBB3	Q13509	450 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	AGTRAP	Q6RW13	159 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	SBSN	Q6UWP8	590 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	KMT5C	Q86Y97	462 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	CARF	Q8N187	725 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	KLHL6	Q8WZ60	621 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	ISL2	Q96A47	359 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	CABS1	Q96KC9	395 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	ALG9	Q9H6U8	611 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	FANCE	Q9HB96	536 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	PDE7B	Q9NP56	450 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	THSD1	Q9NS62	852 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	INTS7	Q9NVH2	962 aa	Known RBP	19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	IRAK4	Q9NWZ3	460 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	PCDHB11	Q9Y5F2	797 aa		19.38	■□□□□ 0.69
IRF3-221	ENST00000598808	EBAG9	O00559	213 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	COPE	O14579	308 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	WISP3	O95389	354 aa	Predicted RBP	19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	ERG	P11308	486 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	TFEB	P19484	476 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	MAG	P20916	626 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	DRD4	P21917	467 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	CMPK1	P30085	196 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	GLRB	P48167	497 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	PDK4	Q16654	411 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	DCAF12	Q5T6F0	453 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	GKAP1	Q5VSY0	366 aa	Predicted RBP	19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	KLC3	Q6P597	504 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	ADCK2	Q7Z695	626 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	RASGRP3	Q8IV61	690 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	HMGCLL1	Q8TB92	370 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	MGARP	Q8TDB4	240 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	ATL1	Q8WXF7	558 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	SLC41A2	Q96JW4	573 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	TRAPPC9	Q96Q05	1148 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	PITPNM3	Q9BZ71	974 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	NMRAL1	Q9HBL8	299 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	OARD1	Q9Y530	152 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	ANKRD12	Q6UB98	2062 aa		19.37	■□□□□ 0.69
IRF3-221	ENST00000598808	FOXO6	A8MYZ6	492 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808		B4E171	279 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	POLR1C	O15160	346 aa	Predicted RBP	19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	PRAMEF10	O60809	474 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	RFPL1	O75677	317 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	CCNDBP1	O95273	360 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	ANXA5	P08758	320 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	PYGB	P11216	843 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	FOLR1	P15328	257 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	TSPAN7	P41732	249 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	WDR4	P57081	412 aa	Known RBP	19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	RAB15	P59190	212 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	NAE1	Q13564	534 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	OR4D1	Q15615	310 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	GPR19	Q15760	415 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	FAM83E	Q2M2I3	478 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	DEFB110	Q30KQ9	67 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	CCDC91	Q7Z6B0	441 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	GPSM1	Q86YR5	675 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	FLVCR1-AS1	Q8TAF5	88 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	PMEPA1	Q969W9	287 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	NXNL1	Q96CM4	212 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	PRR11	Q96HE9	360 aa	Predicted RBP	19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	SLC46A1	Q96NT5	459 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	TAAR9	Q96RI9	348 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	APMAP	Q9HDC9	416 aa		19.36	■□□□□ 0.69
IRF3-221	ENST00000598808	MRPS30	Q9NP92	439 aa	Known RBP	19.36	■□□□□ 0.69

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