RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 MFSD4AQ8N468 514 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 CHAC2Q8WUX2 184 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 VPS33AQ96AX1 596 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 ULK4Q96C45 1275 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 ROPN1LQ96C74 230 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 CD244Q9BZW8 370 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 MTIF3Q9H2K0 278 aaKnown RBP16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 TP63Q9H3D4 680 aaPredicted RBP16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 MAP10Q9P2G4 905 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 OPTCQ9UBM4 332 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 OAZ3Q9UMX2 235 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 NDUFAF1Q9Y375 327 aa16.61■□□□□ 0.25
SHKBP1-205ENST00000594973 FFAR3O14843 346 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 GPR42O15529 346 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 SYNCRIPO60506 623 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 GUCY1B2O75343 617 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 CISD3P0C7P0 127 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 CYP2A6P11509 494 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 ATP1B2P14415 290 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 NR4A1P22736 598 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 EEF1B2P24534 225 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 UFM1P61960 85 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 BNIP2Q12982 314 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 TRAF3Q13114 568 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 CAPRIN1Q14444 709 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 ABRAXAS2Q15018 415 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 ZDHHC20Q5W0Z9 365 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 ZCCHC7Q8N3Z6 543 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 BEND7Q8N7W2 519 aaPredicted RBP16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 OSCP1Q8WVF1 389 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 AIG1Q9NVV5 245 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 ARL15Q9NXU5 204 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 GMPR2Q9P2T1 348 aaKnown RBP16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 ENPP5Q9UJA9 477 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 AURKCQ9UQB9 309 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 ALPK3Q96L96 1907 aa16.6■□□□□ 0.25
SHKBP1-205ENST00000594973 IGLV3-16A0A075B6K0 115 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 UPK3BL1B0FP48 263 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 UPK3BL2E5RIL1 263 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 EI24O14681 340 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 TULP3O75386 442 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 RB1P06400 928 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 YAP1P46937 504 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 TRPC1P48995 793 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 RPIAP49247 311 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 ERVK-8P63133 956 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 AQP6Q13520 282 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 SKIV2LQ15477 1246 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 SULT1C3Q6IMI6 304 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 LCN8Q6JVE9 175 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 CHST15Q7LFX5 561 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 VRK3Q8IV63 474 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 PLPP6Q8IY26 295 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 TRPV3Q8NET8 790 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 MED30Q96HR3 178 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 RIOK2Q9BVS4 552 aaKnown RBP16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 TRIM8Q9BZR9 551 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 KLQ9UEF7 1012 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 DPP7Q9UHL4 492 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 ITM2BQ9Y287 266 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 ISPDA4D126 451 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 C16orf96A6NNT2 1141 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 BBIP1A8MTZ0 92 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 ASNA1O43681 348 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 MATN4O95460 622 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 GPIP06744 558 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 ENO2P09104 434 aaPredicted RBP16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 ZNF30P17039 623 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 AOAHP28039 575 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 CASP2P42575 452 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 GRIN2CQ14957 1233 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 NR6A1Q15406 480 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 LRIT3Q3SXY7 679 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 C9orf50Q5SZB4 431 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 BLOC1S3Q6QNY0 202 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 SLC22A16Q86VW1 577 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 NXPE3Q969Y0 559 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 FUNDC2Q9BWH2 189 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 FBXO10Q9UK96 956 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 TESMINQ9Y4I5 508 aa16.59■□□□□ 0.25
SHKBP1-205ENST00000594973 KRT87PA6NCN2 255 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 OTOL1A6NHN0 477 aaPredicted RBP16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 OR2AG2A6NM03 316 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 KPNA3O00505 521 aaPredicted RBP16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 SCO2O43819 266 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 SLC22A3O75751 556 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 ADH1CP00326 375 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 TCF3P15923 654 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 SLC6A11P48066 632 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 NRIP1P48552 1158 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 METAP1P53582 386 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 ST8SIA6P61647 398 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 YBX1P67809 324 aaKnown RBP16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 SPATS1Q496A3 300 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 ZNF805Q5CZA5 627 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 SGO1Q5FBB7 561 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 FAM78AQ5JUQ0 283 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 PRMT9Q6P2P2 845 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 SLC16A12Q6ZSM3 486 aa16.58■□□□□ 0.25
SHKBP1-205ENST00000594973 UBE2R2Q712K3 238 aaPredicted RBP16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms