RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CXorf40BQ96DE9 158 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 NSL1Q96IY1 281 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 PCBD2Q9H0N5 130 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 ELOVL6Q9H5J4 265 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 USP34Q70CQ2 3546 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 LAMA1P25391 3075 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 ANKRD65E5RJM6 399 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 H0YIV9 168 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 LSM1O15116 133 aaKnown RBP20.08■□□□□ 0.81
PNKP-203ENST00000593946 VILLO15195 856 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 PEX11AO75192 247 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 PDYNP01213 254 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 CALB2P22676 271 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 NCALDP61601 193 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 FRG2Q64ET8 278 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 TAF8Q7Z7C8 310 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 TMEM105Q8N8V8 129 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 FRG2BQ96QU4 278 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 XKR8Q9H6D3 395 aa20.08■□□□□ 0.81
PNKP-203ENST00000593946 ACTR5Q9H9F9 607 aaPredicted RBP20.08■□□□□ 0.81
PNKP-203ENST00000593946 TMEM131Q92545 1883 aa20.08■□□□□ 0.8
PNKP-203ENST00000593946 SERTM1A2A2V5 107 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 SLC28A1O00337 649 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 BCAT2O15382 392 aaPredicted RBP20.07■□□□□ 0.8
PNKP-203ENST00000593946 C1GALT1C1LP0DN25 315 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 VARSP26640 1264 aaKnown RBP20.07■□□□□ 0.8
PNKP-203ENST00000593946 ATP4BP51164 291 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 AFF3P51826 1226 aaKnown RBP20.07■□□□□ 0.8
PNKP-203ENST00000593946 CSTF1Q05048 431 aaKnown RBP20.07■□□□□ 0.8
PNKP-203ENST00000593946 ZNF33BQ06732 778 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 SQLEQ14534 574 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 ATP6AP1LQ52LC2 224 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 SGO1Q5FBB7 561 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 C6orf136Q5SQH8 315 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 CATSPEREQ5SY80 951 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 NXPE4Q6UWF7 544 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 WDR20Q8TBZ3 569 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 SELENOMQ8WWX9 145 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 TAC3Q9UHF0 121 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 TAGLN3Q9UI15 199 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 RGS14O43566 566 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 XRCC1P18887 633 aaPredicted RBP20.07■□□□□ 0.8
PNKP-203ENST00000593946 CSNK1EP49674 416 aaKnown RBP20.07■□□□□ 0.8
PNKP-203ENST00000593946 ERVK-8P63133 956 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 C1orf61Q13536 156 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 NAA25Q14CX7 972 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 NR6A1Q15406 480 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 PMS2CLQ68D20 193 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 SPATA19Q7Z5L4 167 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 C11orf74Q86VG3 221 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 GAB3Q8WWW8 586 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 SH3KBP1Q96B97 665 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 EFCAB11Q9BUY7 163 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 ACAT2Q9BWD1 397 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 SLC40A1Q9NP59 571 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 PCDHGA11Q9Y5H2 935 aa20.07■□□□□ 0.8
PNKP-203ENST00000593946 KIR2DS5A0A0G2JLQ3 304 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 A0A0G2JNG1 304 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 OR5K4A6NMS3 321 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 KIR2DS3K7RE56 304 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 HNRNPCL1O60812 293 aaKnown RBP20.06■□□□□ 0.8
PNKP-203ENST00000593946 ESRRAP11474 423 aaPredicted RBP20.06■□□□□ 0.8
PNKP-203ENST00000593946 PIK3R1P27986 724 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 PSMB5P28074 263 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 PRDX6P30041 224 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 NEK2P51955 445 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 IRX1P78414 480 aaPredicted RBP20.06■□□□□ 0.8
PNKP-203ENST00000593946 KIR2DS5Q14953 304 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 C17orf64Q86WR6 236 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.06■□□□□ 0.8
PNKP-203ENST00000593946 NAGSQ8N159 534 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 ZFPM2Q8WW38 1151 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 PATE1Q8WXA2 126 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 MTFMTQ96DP5 389 aaKnown RBP20.06■□□□□ 0.8
PNKP-203ENST00000593946 PPP3R2Q96LZ3 170 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 ACPTQ9BZG2 426 aa20.06■□□□□ 0.8
PNKP-203ENST00000593946 GEMIN8Q9NWZ8 242 aaKnown RBP20.06■□□□□ 0.8
PNKP-203ENST00000593946 TRBV23OR9-2A0A075B6M9 112 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 CDH1P12830 882 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 SLC2A4P14672 509 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 SHMT2P34897 504 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 UBE2IP63279 158 aaKnown RBP20.05■□□□□ 0.8
PNKP-203ENST00000593946 HMGCS1Q01581 520 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 SRSF5Q13243 272 aaKnown RBP20.05■□□□□ 0.8
PNKP-203ENST00000593946 SLBPQ14493 270 aaKnown RBP eCLIP20.05■□□□□ 0.8
PNKP-203ENST00000593946 ELOCQ15369 112 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 LYSMD4Q5XG99 296 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 OR7G3Q8NG95 312 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 SLC7A6OSQ96CW6 309 aaPredicted RBP20.05■□□□□ 0.8
PNKP-203ENST00000593946 CMTM5Q96DZ9 223 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 POT1Q9NUX5 634 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 OR6C2Q9NZP2 312 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 NPIPB8E9PQR5 432 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 PRICKLE3O43900 615 aaPredicted RBP20.05■□□□□ 0.8
PNKP-203ENST00000593946 IDO1P14902 403 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 MRPL19P49406 292 aaKnown RBP20.05■□□□□ 0.8
PNKP-203ENST00000593946 YBX1P67809 324 aaKnown RBP20.05■□□□□ 0.8
PNKP-203ENST00000593946 GSTA3Q16772 222 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 IMPG1Q17R60 797 aa20.05■□□□□ 0.8
PNKP-203ENST00000593946 SMU1Q2TAY7 513 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms