RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 ZNF282Q9UDV7 671 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-238ENST00000592412 ZC3H7BQ9UGR2 993 aaKnown RBP17.42■□□□□ 0.38
CIRBP-238ENST00000592412 SLC39A10Q9ULF5 831 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 RIMKLBQ9ULI2 386 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 MRPS2Q9Y399 296 aaKnown RBP17.42■□□□□ 0.38
CIRBP-238ENST00000592412 MTORP42345 2549 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 HEATR9A2RTY3 570 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 GRID2IPA4D2P6 1211 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 FFAR3O14843 346 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 GPR42O15529 346 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 PSMD3O43242 534 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 USP1O94782 785 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 FKBP9O95302 570 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 C1orf105O95561 183 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 F10P00742 488 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 SPA17Q15506 151 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 INAQ16352 499 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 PRMT9Q6P2P2 845 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 NDUFAF7Q7L592 441 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 LINC00523Q86TU6 105 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 HMGCLL1Q8TB92 370 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 VPS50Q96JG6 964 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 LACRTQ9GZZ8 138 aa17.41■□□□□ 0.38
CIRBP-238ENST00000592412 IGHV1-45A0A0A0MS14 117 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 NSG1A0A0A6YYJ2 146 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 TRAV17A0A0B4J275 112 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 OR2A25A4D2G3 310 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 IDSB3KWA1 339 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 SUN1O94901 812 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 SERPINA7P05543 415 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 APOA4P06727 396 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 OCA2Q04671 838 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 EEF1A2Q05639 463 aaKnown RBP17.4■□□□□ 0.38
CIRBP-238ENST00000592412 FASTKQ14296 549 aaKnown RBP17.4■□□□□ 0.38
CIRBP-238ENST00000592412 SKOR2Q2VWA4 1001 aaPredicted RBP17.4■□□□□ 0.38
CIRBP-238ENST00000592412 PRTGQ2VWP7 1150 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 FBXO42Q6P3S6 717 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 GFRALQ6UXV0 394 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 DNAAF3Q8N9W5 541 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 RNF214Q8ND24 703 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 OR6P1Q8NGX9 317 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 RAB11FIP5Q9BXF6 653 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 P2RY12Q9H244 342 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 PACSIN2Q9UNF0 486 aaPredicted RBP17.4■□□□□ 0.38
CIRBP-238ENST00000592412 FAM169AQ9Y6X4 670 aa17.4■□□□□ 0.38
CIRBP-238ENST00000592412 DYTNA2CJ06 578 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 SOWAHDA6NJG2 315 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 BTNL10A8MVZ5 291 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 EIF2S1P05198 315 aaKnown RBP17.39■□□□□ 0.37
CIRBP-238ENST00000592412 FBLP22087 321 aaKnown RBP17.39■□□□□ 0.37
CIRBP-238ENST00000592412 ADRA1DP25100 572 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 FASTKD1Q53R41 847 aaKnown RBP17.39■□□□□ 0.37
CIRBP-238ENST00000592412 MRGPRGQ86SM5 289 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 ARHGEF39Q8N4T4 335 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 AMER3Q8N944 861 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 RAD51AP1Q96B01 352 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 TTC1Q99614 292 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 ETNK1Q9HBU6 452 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 TTC7AQ9ULT0 858 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-238ENST00000592412 TCAF1Q9Y4C2 921 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 PCNX1Q96RV3 2341 aa17.39■□□□□ 0.37
CIRBP-238ENST00000592412 TRGV8A0A0C4DH27 118 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 F8W8V4 182 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 PRMT5O14744 637 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-238ENST00000592412 UNC5CO95185 931 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 BMP10O95393 424 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 WDPCPO95876 746 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 ITGAMP11215 1152 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 FDXRP22570 491 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 CYLC1P35663 651 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-238ENST00000592412 CETN2P41208 172 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 CA7P43166 264 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 RIPPLY3P57055 190 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 SNRPNP63162 240 aaKnown RBP17.38■□□□□ 0.37
CIRBP-238ENST00000592412 DSG2Q14126 1118 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 PCOLCEQ15113 449 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 ZNF630Q2M218 657 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-238ENST00000592412 MUM1Q2TAK8 710 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 CNSTQ6PJW8 725 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 BNC2Q6ZN30 1099 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-238ENST00000592412 ATG4AQ8WYN0 398 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 CALR3Q96L12 384 aaKnown RBP17.38■□□□□ 0.37
CIRBP-238ENST00000592412 LURAP1Q96LR2 239 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 ZFYVE21Q9BQ24 234 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 TSSK1BQ9BXA7 367 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 ABI3Q9P2A4 366 aa17.38■□□□□ 0.37
CIRBP-238ENST00000592412 EPN1Q9Y6I3 576 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-238ENST00000592412 IGKV1-8A0A0C4DH67 115 aa17.37■□□□□ 0.37
CIRBP-238ENST00000592412 A0A0U1RQJ8 604 aa17.37■□□□□ 0.37
CIRBP-238ENST00000592412 GOLGA6L9A6NEM1 432 aa17.37■□□□□ 0.37
CIRBP-238ENST00000592412 ERI2A8K979 691 aaKnown RBP17.37■□□□□ 0.37
CIRBP-238ENST00000592412 H0YGG7 62 aa17.37■□□□□ 0.37
CIRBP-238ENST00000592412 HTR1EP28566 365 aa17.37■□□□□ 0.37
CIRBP-238ENST00000592412 PTGER4P35408 488 aa17.37■□□□□ 0.37
CIRBP-238ENST00000592412 EMP2P54851 167 aa17.37■□□□□ 0.37
CIRBP-238ENST00000592412 NAP1L1P55209 391 aaKnown RBP17.37■□□□□ 0.37
CIRBP-238ENST00000592412 ARF3P61204 181 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-238ENST00000592412 OASLQ15646 514 aaKnown RBP17.37■□□□□ 0.37
CIRBP-238ENST00000592412 ZXDCQ2QGD7 858 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-238ENST00000592412 HKDC1Q2TB90 917 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms