RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 HBQ1P09105 142 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 CTAGE8P0CG41 777 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 SAT1P21673 171 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 PTPN4P29074 926 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 IMPA1P29218 277 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 RPS15P62841 145 aaKnown RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 PRDX1Q06830 199 aaKnown RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 CDC20Q12834 499 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 ILF2Q12905 390 aaKnown RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 SP140Q13342 867 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 ERV3-1Q14264 604 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 NAA25Q14CX7 972 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 PTCHD3Q3KNS1 767 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 LINC00303Q3SY05 128 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 ATP1A1-AS1Q5TC04 95 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 RHBDD2Q6NTF9 364 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 C16orf46Q6P387 395 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 TLDC1Q6P9B6 456 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 TMEM207Q6UWW9 146 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 CTAGE6Q86UF2 777 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 CTAGE4Q8IX94 777 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 LRRC56Q8IYG6 542 aaPredicted RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 ZNF655Q8N720 491 aaPredicted RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 CDKL2Q92772 493 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 PDLIM5Q96HC4 596 aaKnown RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 CCDC138Q96M89 665 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 CATSPER2Q96P56 530 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 RUFY1Q96T51 708 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 DPH2Q9BQC3 489 aaPredicted RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 DPH7Q9BTV6 452 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 RHOJQ9H4E5 214 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 LRRC4CQ9HCJ2 640 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 SLC6A20Q9NP91 592 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 MRPS30Q9NP92 439 aaKnown RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 ZDHHC18Q9NUE0 388 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 STOX2Q9P2F5 926 aaPredicted RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 TXNDC16Q9P2K2 825 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 TAC3Q9UHF0 121 aa8.82□□□□□ -1
DNMT1-223ENST00000591239 DMGDHQ9UI17 866 aaKnown RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 FARSAQ9Y285 508 aaKnown RBP8.82□□□□□ -1
DNMT1-223ENST00000591239 IGKV1-8A0A0C4DH67 115 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 OR2A25A4D2G3 310 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 C2orf72A6NCS6 295 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 EIF4E1BA6NMX2 242 aaKnown RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 NRP2O60462 931 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 SRPX2O60687 465 aaPredicted RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 CCNDBP1O95273 360 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 RECKO95980 971 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 C1QAP02745 245 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 CAPN1P07384 714 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 FURINP09958 794 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 RAB40ALP0C0E4 278 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 ZNF37AP17032 561 aaPredicted RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 AGXTP21549 392 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 TAS2R39P59534 338 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 RPS18P62269 152 aaKnown RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 POU4F1Q01851 419 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 COL9A2Q14055 689 aaPredicted RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 LY6DQ14210 128 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 ZNF460Q14592 562 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 PHKG1Q16816 387 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 KBTBD12Q3ZCT8 623 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 GLE1Q53GS7 698 aaKnown RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 TCTE1Q5JU00 501 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 THEMIS2Q5TEJ8 643 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 C1orf189Q5VU69 101 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 ICE2Q659A1 982 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 ZNF385CQ66K41 422 aaPredicted RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 FRMPD2BQ6IN97 320 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 FBXO42Q6P3S6 717 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 BORAQ6PGQ7 559 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 MBOAT1Q6ZNC8 495 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 CEP97Q8IW35 865 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 CTAGE3PQ8IX95 158 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 NKAPQ8N5F7 415 aaKnown RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 VPS39Q96JC1 886 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 ZNF285Q96NJ3 590 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 CPNE1Q99829 537 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 SELENOSQ9BQE4 189 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 PLCD4Q9BRC7 762 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 ARHGAP9Q9BRR9 750 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 NDC1Q9BTX1 674 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 NLNQ9BYT8 704 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 FAM117AQ9C073 453 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 CCDC177Q9NQR7 707 aaPredicted RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 STARD5Q9NSY2 213 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 TXLNGQ9NUQ3 528 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 ABCF3Q9NUQ8 709 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 ANKMY1Q9P2S6 941 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 DHCR7Q9UBM7 475 aaKnown RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 SRPK3Q9UPE1 567 aa8.81□□□□□ -1
DNMT1-223ENST00000591239 MTO1Q9Y2Z2 717 aaKnown RBP8.81□□□□□ -1
DNMT1-223ENST00000591239 LOC105369274A0A096LPK9 316 aa8.8□□□□□ -1
DNMT1-223ENST00000591239 LOC102723532A0A0G2JNH3 316 aa8.8□□□□□ -1
DNMT1-223ENST00000591239 A0A0J9YVX5 310 aa8.8□□□□□ -1
DNMT1-223ENST00000591239 FITM1A5D6W6 292 aa8.8□□□□□ -1
DNMT1-223ENST00000591239 PABPN1LA6NDY0 278 aaKnown RBP8.8□□□□□ -1
DNMT1-223ENST00000591239 C9J4A7 227 aa8.8□□□□□ -1
DNMT1-223ENST00000591239 PRB1P04280 392 aa8.8□□□□□ -1
DNMT1-223ENST00000591239 HIST1H2AGP0C0S8 130 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms