RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 PSMB5P28074 263 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 PRDX3P30048 256 aaKnown RBP20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 ETV5P41161 510 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 MAPK10P53779 464 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 PNLIPRP1P54315 467 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 YBX1P67809 324 aaKnown RBP20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 PRKAA1Q13131 559 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 ANKS6Q68DC2 871 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 SUSD1Q6UWL2 747 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 TIFABQ6ZNK6 161 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 TBC1D1Q86TI0 1168 aaPredicted RBP20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 TDRPQ86YL5 185 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 LRRC56Q8IYG6 542 aaPredicted RBP20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 ANKRD7Q92527 254 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 ZDHHC12Q96GR4 267 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 GPR78Q96P69 363 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 B3GNT4Q9C0J1 378 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 KLHL25Q9H0H3 589 aa20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 STOX2Q9P2F5 926 aaPredicted RBP20.7■□□□□ 0.9
R3HDM4-206ENST00000590454 IQANK1A0A1B0GTG1 560 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 TLDC2A0PJX2 215 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 C2orf74A8MZ97 194 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 ISM1B1AKI9 464 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 C9orf172C9J069 976 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 KDM1AO60341 852 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 RASSF9O75901 435 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 TFEBP19484 476 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 GLRBP48167 497 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 SEPHS1P49903 392 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 BEND6Q5SZJ8 279 aaPredicted RBP20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 TMEM164Q5U3C3 297 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 CACHD1Q5VU97 1274 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 ISCA2Q86U28 154 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 HMGCLL1Q8TB92 370 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 ALG9Q9H6U8 611 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 ARL15Q9NXU5 204 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 LNPEPQ9UIQ6 1025 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 NOVA2Q9UNW9 492 aaKnown RBP20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 KLHL20Q9Y2M5 609 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 OARD1Q9Y530 152 aa20.69■□□□□ 0.9
R3HDM4-206ENST00000590454 CCDC151A5D8V7 595 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 E7ENX8 843 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 GOLGA8RI6L899 631 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 KLHL2O95198 593 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 SLC26A3P40879 764 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 ATP6V0D1P61421 351 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 TAP2Q03519 686 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 IFFO1Q0D2I5 559 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 TSTA3Q13630 321 aaPredicted RBP20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 C18orf21Q32NC0 220 aaPredicted RBP20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 LGSNQ5TDP6 509 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 BORAQ6PGQ7 559 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 SPESP1Q6UW49 350 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 PRSS42Q7Z5A4 293 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 PTRH1Q86Y79 214 aaKnown RBP20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 KIAA1191Q96A73 305 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 MTBPQ96DY7 904 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 CCDC138Q96M89 665 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 RAB11FIP5Q9BXF6 653 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 ATG10Q9H0Y0 220 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 ABCF3Q9NUQ8 709 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 PCMTD2Q9NV79 361 aa20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 AKAP7Q9P0M2 348 aaPredicted RBP20.68■□□□□ 0.9
R3HDM4-206ENST00000590454 TLCD2A6NGC4 264 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 SLC9B1P1A6NJY1 282 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 ENO2P09104 434 aaPredicted RBP20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 CCL4P13236 92 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 ST6GAL1P15907 406 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 TRA2AQ13595 282 aaKnown RBP eCLIP20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 KIR2DS3Q14952 304 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 ARHGAP19Q14CB8 494 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 AGTRAPQ6RW13 159 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 ADAMTSL2Q86TH1 951 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 SYTL1Q8IYJ3 562 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 IQCKQ8N0W5 287 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 RAB42Q8N4Z0 105 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 EXT2Q93063 718 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 ACAT2Q9BWD1 397 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 PITPNM3Q9BZ71 974 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 NMRAL1Q9HBL8 299 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 OCIAD1Q9NX40 245 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 SEMA5BQ9P283 1151 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 BOD1L1Q8NFC6 3051 aa20.67■□□□□ 0.9
R3HDM4-206ENST00000590454 NCF1BA6NI72 391 aaPredicted RBP20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 NCF1CA8MVU1 366 aaPredicted RBP20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 MATN2O00339 956 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 CDH16O75309 829 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 ERLIN1O75477 346 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 HIST1H2AGP0C0S8 130 aaPredicted RBP20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 ANKRD34CP0C6C1 535 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 PYGBP11216 843 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 NCF1P14598 390 aaPredicted RBP20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 HIST1H2ADP20671 130 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 CDH3P22223 829 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 SH3BP2P78314 561 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 ZNF844Q08AG5 666 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 KCNAB1Q14722 419 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 RASA2Q15283 850 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 TGFBIQ15582 683 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms