RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 FBXL20Q96IG2 436 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 PLEKHG4BQ96PX9 1271 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 C1orf50Q9BV19 199 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 NPLQ9BXD5 320 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 NANOGQ9H9S0 305 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 INTS7Q9NVH2 962 aaKnown RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 EIF2B4Q9UI10 523 aaKnown RBP14.24□□□□□ -0.13
CCDC43-203ENST00000588210 COMMD10Q9Y6G5 202 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 CEP192Q8TEP8 1941 aa14.24□□□□□ -0.13
CCDC43-203ENST00000588210 A0A0J9YVX5 310 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 C10orf142B7Z368 130 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 IL12AP29459 219 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 TTKP33981 857 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 CDKN1CP49918 316 aaPredicted RBP14.23□□□□□ -0.13
CCDC43-203ENST00000588210 IL2P60568 153 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 POLR2LP62875 67 aaKnown RBP14.23□□□□□ -0.13
CCDC43-203ENST00000588210 NUMA1Q14980 2115 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 CYBRD1Q53TN4 286 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 KIAA0895LQ68EN5 471 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 GPSM1Q86YR5 675 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 SIDT2Q8NBJ9 832 aaKnown RBP14.23□□□□□ -0.13
CCDC43-203ENST00000588210 KCNJ9Q92806 393 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 TMEM74Q96NL1 305 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 YTHDF1Q9BYJ9 559 aaKnown RBP14.23□□□□□ -0.13
CCDC43-203ENST00000588210 RPF2Q9H7B2 306 aaKnown RBP14.23□□□□□ -0.13
CCDC43-203ENST00000588210 NUDT4Q9NZJ9 180 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 MAGEL2Q9UJ55 1249 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.23□□□□□ -0.13
CCDC43-203ENST00000588210 PCDHGC4Q9Y5F7 938 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 ST14Q9Y5Y6 855 aa14.23□□□□□ -0.13
CCDC43-203ENST00000588210 OR4F21O95013 312 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 MC4RP32245 332 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 CCR5P51681 352 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 ADARB1P78563 741 aaKnown RBP14.22□□□□□ -0.13
CCDC43-203ENST00000588210 PRKG2Q13237 762 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 ATP6AP1LQ52LC2 224 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 ARMCX6Q7L4S7 300 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 ASCL5Q7RTU5 278 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 CYP2U1Q7Z449 544 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 HID1Q8IV36 788 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 PIANPQ8IYJ0 282 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 FNDC5Q8NAU1 212 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 LPCAT1Q8NF37 534 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 ZNF420Q8TAQ5 688 aaPredicted RBP14.22□□□□□ -0.13
CCDC43-203ENST00000588210 PROKR1Q8TCW9 393 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 DNASE2BQ8WZ79 361 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 BIRC7Q96CA5 298 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 FAM122AQ96E09 287 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 GALNT8Q9NY28 637 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 CD274Q9NZQ7 290 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 SLAMF8Q9P0V8 285 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 NCDNQ9UBB6 729 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 FKBPLQ9UIM3 349 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 ASB1Q9Y576 335 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 PCDHB3Q9Y5E6 796 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 TSPAN6O43657 245 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 CDH1P12830 882 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 TIMP2P16035 220 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 XPAP23025 273 aaPredicted RBP14.22□□□□□ -0.13
CCDC43-203ENST00000588210 ADARP55265 1226 aaKnown RBP14.22□□□□□ -0.13
CCDC43-203ENST00000588210 CTBSQ01459 385 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 AARS2Q5JTZ9 985 aaKnown RBP14.22□□□□□ -0.13
CCDC43-203ENST00000588210 SCIMPQ6UWF3 145 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 TRIM69Q86WT6 500 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 SYT12Q8IV01 421 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 RIMKLAQ8IXN7 391 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 CPNE9Q8IYJ1 553 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 PAF1Q8N7H5 531 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 EEF1AKMT1Q8WVE0 214 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 C12orf43Q96C57 262 aaKnown RBP14.22□□□□□ -0.13
CCDC43-203ENST00000588210 DOK1Q99704 481 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 PILRBQ9UKJ0 227 aa14.22□□□□□ -0.13
CCDC43-203ENST00000588210 H0YAE9 185 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 H7C0S8 307 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 IFRD1O00458 451 aaPredicted RBP14.21□□□□□ -0.13
CCDC43-203ENST00000588210 AREL1O15033 823 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 SEC24DO94855 1032 aaPredicted RBP14.21□□□□□ -0.13
CCDC43-203ENST00000588210 IGHV4-34P06331 123 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 ITPKAP23677 461 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 HOXD12P35452 270 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 PLA2G5P39877 138 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 CASP2P42575 452 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 RANBP1P43487 201 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 OR4D2P58180 307 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 ERVPABLB-1P60509 514 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 ELP6Q0PNE2 266 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 PEAR1Q5VY43 1037 aaPredicted RBP14.21□□□□□ -0.13
CCDC43-203ENST00000588210 SLC2A7Q6PXP3 512 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 Q6ZSR9 355 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 RGL4Q8IZJ4 473 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 OFCC1Q8IZS5 231 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 CDYL2Q8N8U2 506 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 MAGEE2Q8TD90 523 aaPredicted RBP14.21□□□□□ -0.13
CCDC43-203ENST00000588210 NSMCE2Q96MF7 247 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 BDH2Q9BUT1 245 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 ARRDC1-AS1Q9H2J1 176 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 ZNHIT2Q9UHR6 403 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 USP22Q9UPT9 525 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 RAI2Q9Y5P3 530 aa14.21□□□□□ -0.13
CCDC43-203ENST00000588210 UPK3BL1B0FP48 263 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms