RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 CCDC124Q96CT7 223 aaKnown RBP19.19■□□□□ 0.66
TRIM47-204ENST00000587339 MTERF1Q99551 399 aaKnown RBP19.19■□□□□ 0.66
TRIM47-204ENST00000587339 GPR174Q9BXC1 333 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 WSB2Q9NYS7 404 aaPredicted RBP19.19■□□□□ 0.66
TRIM47-204ENST00000587339 A0A1W2PP18 115 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 FAM234BA2RU67 622 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 ZNF839A8K0R7 811 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 ZNF217O75362 1048 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 CD6P30203 668 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 ZP2Q05996 745 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 CSTF3Q12996 717 aaKnown RBP19.19■□□□□ 0.66
TRIM47-204ENST00000587339 CLCA4Q14CN2 919 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 KIAA0040Q15053 153 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 PRPF38BQ5VTL8 546 aaKnown RBP19.19■□□□□ 0.66
TRIM47-204ENST00000587339 LAYNQ6UX15 382 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 RETREG3Q86VR2 466 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 SIX5Q8N196 739 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 RAB42Q8N4Z0 105 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 SLC5A11Q8WWX8 675 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 TSACCQ96A04 125 aaPredicted RBP19.19■□□□□ 0.66
TRIM47-204ENST00000587339 ROPN1LQ96C74 230 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 BIRC7Q96CA5 298 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 NELL2Q99435 816 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 EFCAB11Q9BUY7 163 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 EHD1Q9H4M9 534 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 ACTL8Q9H568 366 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 SLC52A3Q9NQ40 469 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 PRDM8Q9NQV8 689 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 ASIC5Q9NY37 505 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 SPATA7Q9P0W8 599 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 SH2B3Q9UQQ2 575 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 PCDHGA7Q9Y5G6 932 aa19.19■□□□□ 0.66
TRIM47-204ENST00000587339 CCDC154A6NI56 674 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 NPIPB8E9PQR5 432 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 TNFRSF10CO14798 259 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 C1GALT1C1LP0DN25 315 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 DPP6P42658 865 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 ZFP36L2P47974 494 aaKnown RBP19.18■□□□□ 0.66
TRIM47-204ENST00000587339 DDX39BQ13838 428 aaKnown RBP19.18■□□□□ 0.66
TRIM47-204ENST00000587339 KRT33BQ14525 404 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 PTGR1Q14914 329 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 COQ5Q5HYK3 327 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 PAGE2BQ5JRK9 111 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 ATG9BQ674R7 924 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 MED27Q6P2C8 311 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 LCTLQ6UWM7 567 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 HACD2Q6Y1H2 254 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 RIPOR1Q6ZS17 1223 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 Q6ZSR6 202 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 RNF175Q8N4F7 328 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 OR7G3Q8NG95 312 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 VPS33AQ96AX1 596 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 WDR34Q96EX3 536 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 CMTM7Q96FZ5 175 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 HAUS8Q9BT25 410 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 MENTQ9BUN1 341 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 TPSD1Q9BZJ3 242 aa19.18■□□□□ 0.66
TRIM47-204ENST00000587339 OR52A4PA6NMU1 304 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 TOR1BO14657 336 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 ANKRD28O15084 1053 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 SORBS2O94875 1100 aaKnown RBP19.17■□□□□ 0.66
TRIM47-204ENST00000587339 JAK1P23458 1154 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 IL12AP29459 219 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 PSME3P61289 254 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 CYP2A13Q16696 494 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 LIX1Q8N485 282 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 RLN3Q8WXF3 142 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 REPS1Q96D71 796 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 ACAT2Q9BWD1 397 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 PRM3Q9NNZ6 103 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 PRDM6Q9NQX0 595 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 MAP10Q9P2G4 905 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 CROTQ9UKG9 612 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 DMTF1Q9Y222 760 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 TMED5Q9Y3A6 229 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 PCNAP12004 261 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 RABIFP47224 123 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 ACTR3P61158 418 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 PIGGQ5H8A4 983 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 NXPE4Q6UWF7 544 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 STMN2Q93045 179 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 SH3KBP1Q96B97 665 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 NRTNQ99748 197 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 BRF2Q9HAW0 419 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 SPAG4Q9NPE6 437 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 VPS29Q9UBQ0 182 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 PACSIN3Q9UKS6 424 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 POMPQ9Y244 141 aa19.17■□□□□ 0.66
TRIM47-204ENST00000587339 DYTNA2CJ06 578 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 BCKDHAP12694 445 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 HSD3B1P14060 373 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 HSD3B2P26439 372 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 SRP54P61011 504 aaKnown RBP19.16■□□□□ 0.66
TRIM47-204ENST00000587339 CTBSQ01459 385 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 SLBPQ14493 270 aaKnown RBP eCLIP19.16■□□□□ 0.66
TRIM47-204ENST00000587339 HIST2H2ACQ16777 129 aaPredicted RBP19.16■□□□□ 0.66
TRIM47-204ENST00000587339 TIGD2Q4W5G0 525 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 USP39Q53GS9 565 aaKnown RBP19.16■□□□□ 0.66
TRIM47-204ENST00000587339 HIST2H2AA3Q6FI13 130 aa19.16■□□□□ 0.66
TRIM47-204ENST00000587339 ABI3BPQ7Z7G0 1075 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms