RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 PTMAP06454 111 aaKnown RBP13.79□□□□□ -0.2
SDF2-202ENST00000585428 PRR35P0CG20 571 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 ACPPP15309 386 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 PSMB5P28074 263 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 SOX11P35716 441 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 TTPAP49638 278 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 TNFSF10P50591 281 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 YBX1P67809 324 aaKnown RBP13.79□□□□□ -0.2
SDF2-202ENST00000585428 PRAMEP78395 509 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 RNF44Q7L0R7 432 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 FJX1Q86VR8 437 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 MRFAP1L1Q96HT8 127 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 HES6Q96HZ4 224 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 PLA2G3Q9NZ20 509 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 COPG2Q9UBF2 871 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 ANAPC5Q9UJX4 755 aa13.79□□□□□ -0.2
SDF2-202ENST00000585428 MDC1Q14676 2089 aaKnown RBP13.79□□□□□ -0.2
SDF2-202ENST00000585428 CROCCQ5TZA2 2017 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 A0A0J9YVX5 310 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 KRT87PA6NCN2 255 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 LIASO43766 372 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 MATN4O95460 622 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 COX6A1P12074 109 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 RPS3P23396 243 aaKnown RBP eCLIP13.78□□□□□ -0.2
SDF2-202ENST00000585428 ART3Q13508 389 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 FASTKQ14296 549 aaKnown RBP13.78□□□□□ -0.2
SDF2-202ENST00000585428 MUM1Q2TAK8 710 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 AARS2Q5JTZ9 985 aaKnown RBP13.78□□□□□ -0.2
SDF2-202ENST00000585428 PCID2Q5JVF3 399 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 PTRHD1Q6GMV3 140 aaKnown RBP13.78□□□□□ -0.2
SDF2-202ENST00000585428 PPP1R21Q6ZMI0 780 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 PRSS58Q8IYP2 241 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 SYCE1Q8N0S2 351 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 ATG4AQ8WYN0 398 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 C10orf90Q96M02 699 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 PANX3Q96QZ0 392 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 TREX1Q9NSU2 369 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 CATSPERZQ9NTU4 200 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 PTGFRNQ9P2B2 879 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 MRFAP1Q9Y605 127 aa13.78□□□□□ -0.2
SDF2-202ENST00000585428 CSMD1Q96PZ7 3565 aa13.77□□□□□ -0.2
SDF2-202ENST00000585428 IGHV1-45A0A0A0MS14 117 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 NSG1A0A0A6YYJ2 146 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 TRAV17A0A0B4J275 112 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 DYTNA2CJ06 578 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 IDSB3KWA1 339 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 H0YGG7 62 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 MAP2K7O14733 419 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 IPO7O95373 1038 aaKnown RBP13.77□□□□□ -0.21
SDF2-202ENST00000585428 BMP10O95393 424 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 EIF2S1P05198 315 aaKnown RBP13.77□□□□□ -0.21
SDF2-202ENST00000585428 SERPINA7P05543 415 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 ETS1P14921 441 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 FDXRP22570 491 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 SLC26A3P40879 764 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 CCNFP41002 786 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 EMP2P54851 167 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 KCNK10P57789 538 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 ARF3P61204 181 aaPredicted RBP13.77□□□□□ -0.21
SDF2-202ENST00000585428 ARG2P78540 354 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 GBX1Q14549 363 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 PCM1Q15154 2024 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 TMED2Q15363 201 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 PRUNE1Q86TP1 453 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 LRRC6Q86X45 466 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 ARHGEF39Q8N4T4 335 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 ACRBPQ8NEB7 543 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 GSDMBQ8TAX9 411 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 MAGEC3Q8TD91 643 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 BRIX1Q8TDN6 353 aaKnown RBP13.77□□□□□ -0.21
SDF2-202ENST00000585428 NR4A3Q92570 626 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 BIRC8Q96P09 236 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 ZFYVE21Q9BQ24 234 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 DPH7Q9BTV6 452 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 TGIF2Q9GZN2 237 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 SYNPO2LQ9H987 977 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 RAB6BQ9NRW1 208 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 CDC14AQ9UNH5 594 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 KLF2Q9Y5W3 355 aaPredicted RBP13.77□□□□□ -0.21
SDF2-202ENST00000585428 FAM169AQ9Y6X4 670 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 OTOGQ6ZRI0 2925 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 APCP25054 2843 aa13.77□□□□□ -0.21
SDF2-202ENST00000585428 DOCK10Q96BY6 2186 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 FBN2P35556 2912 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 LOC102723996A0A087X1L8 192 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 IGKV1-8A0A0C4DH67 115 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 PRSS44E7EML9 344 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 E7EVH7 732 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 FTCDO95954 541 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 IFNB1P01574 187 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 ERGP11308 486 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 BDKRB1P46663 353 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 DSG2Q14126 1118 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 INAQ16352 499 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 RIPOR1Q6ZS17 1223 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 OTOAQ7RTW8 1153 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 MPP5Q8N3R9 675 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 RAB42Q8N4Z0 105 aa13.76□□□□□ -0.21
SDF2-202ENST00000585428 AMER3Q8N944 861 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms