RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 TFP02787 698 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 ANXA7P20073 488 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 GATA3P23771 443 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 NR2F2P24468 414 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 FPR3P25089 353 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 MT3P25713 68 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 PON1P27169 355 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CCND3P30281 292 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CDC25CP30307 473 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 YWHABP31946 246 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 NPY4RP50391 375 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 UBE2HP62256 183 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 SNRPEP62304 92 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 TUBB4BP68371 445 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 GPC5P78333 572 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 GTF2BQ00403 316 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 MZT1Q08AG7 82 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 EMC2Q15006 297 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 FILIP1LQ4L180 1135 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 SPDYCQ5MJ68 293 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 PAPD7Q5XG87 772 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 KRTAP5-3Q6L8H2 238 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 SHC4Q6S5L8 630 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 ZNF793Q6ZN11 406 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 DEF8Q6ZN54 512 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 ARCQ7LC44 396 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 YTHDF3Q7Z739 585 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 NLRP14Q86W24 1093 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 WDR49Q8IV35 697 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CFAP206Q8IYR0 622 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 OR14L1PQ8NHC6 308 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 FAR1Q8WVX9 515 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 GLMPQ8WWB7 406 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 IRGQQ8WZA9 623 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 RAD54LQ92698 747 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 TOP1MTQ969P6 601 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 AZIN2Q96A70 460 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 NXNL1Q96CM4 212 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 MTBPQ96DY7 904 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 THOC1Q96FV9 657 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 WBP1Q96G27 269 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 DGAT2Q96PD7 388 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 TRNAU1APQ9NX07 287 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 VPS18Q9P253 973 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 VPS51Q9UID3 782 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CD207Q9UJ71 328 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 APPL1Q9UKG1 709 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 MTF2Q9Y483 593 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 LOC105369274A0A096LPK9 316 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 A0A0B4J293 547 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 LOC102723532A0A0G2JNH3 316 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 GSTTP1A0A1W2PQM5 241 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 EIF4E1BA6NMX2 242 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 SLC33A1O00400 549 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 MSH4O15457 936 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 SYNCRIPO60506 623 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 KINO60870 393 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 C1QL1O75973 258 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 PNPP00491 289 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 ADAP00813 363 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 ODC1P11926 461 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 EZRP15311 586 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 IL10P22301 178 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 HOXA6P31267 233 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 STAT6P42226 847 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 DIO1P49895 249 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 BLKP51451 505 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CCR3P51677 355 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 PRKCEQ02156 737 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 DEUP1Q05D60 604 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 FOXM1Q08050 763 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 LMAN2Q12907 356 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CAPSQ13938 189 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 DMC1Q14565 340 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 KARSQ15046 597 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 FBXO43Q4G163 708 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 GLIPR1L2Q4G1C9 344 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 XKR9Q5GH70 373 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 ZDHHC20Q5W0Z9 365 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 FAM90A2PQ658T7 463 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 DHRS7BQ6IAN0 325 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 Q6ZPA2 131 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CROCCP3Q8IVE0 287 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 OR4N4Q8N0Y3 316 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CREB3L4Q8TEY5 395 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 C18orf25Q96B23 403 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 MMABQ96EY8 250 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CABS1Q96KC9 395 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CEP170P1Q96L14 293 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 NSMCE3Q96MG7 304 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 NLRP4Q96MN2 994 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 CFAP57Q96MR6 1250 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 RUFY1Q96T51 708 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 PHF7Q9BWX1 381 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 FSD1LQ9BXM9 530 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 FUT8Q9BYC5 575 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 TRIM6Q9C030 488 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 TSPY26PQ9H489 355 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 TXNRD2Q9NNW7 524 aa1.88□□□□□ -2.11
SMCHD1-211ENST00000584897 EXOC1Q9NV70 894 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms