RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 IRAK4Q9NWZ3 460 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 MARCH4Q9P2E8 410 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-206ENST00000584112 GPN3Q9UHW5 284 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-206ENST00000584112 SLC39A10Q9ULF5 831 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 PLCL2Q9UPR0 1127 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 PCDHGB7Q9Y5F8 929 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 COPG1Q9Y678 874 aaKnown RBP10.69□□□□□ -0.7
CCDC47-206ENST00000584112 H3BMH7 237 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 H3BMM5 538 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 E2F3O00716 465 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 RASGRF2O14827 1237 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 VAPBO95292 243 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 PAMP19021 973 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 MGAT1P26572 445 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 PEBP1P30086 187 aaKnown RBP10.68□□□□□ -0.7
CCDC47-206ENST00000584112 DNAJA1P31689 397 aaKnown RBP10.68□□□□□ -0.7
CCDC47-206ENST00000584112 CXCR5P32302 372 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 CCNFP41002 786 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 PTGIRP43119 386 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 GABRA4P48169 554 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 EIF3BP55884 814 aaKnown RBP10.68□□□□□ -0.7
CCDC47-206ENST00000584112 CCZ1BP86790 482 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 CCZ1P86791 482 aaPredicted RBP10.68□□□□□ -0.7
CCDC47-206ENST00000584112 ZIC1Q15915 447 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 DEFB110Q30KQ9 67 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 ZNF385CQ66K41 422 aaPredicted RBP10.68□□□□□ -0.7
CCDC47-206ENST00000584112 CLEC9AQ6UXN8 241 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 HPS6Q86YV9 775 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 PARP9Q8IXQ6 854 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 TMEM102Q8N9M5 508 aaPredicted RBP10.68□□□□□ -0.7
CCDC47-206ENST00000584112 OR2L8Q8NGY9 312 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 MAGEC3Q8TD91 643 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 SKA2Q8WVK7 121 aaPredicted RBP10.68□□□□□ -0.7
CCDC47-206ENST00000584112 DLG3Q92796 817 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 RAD51AP1Q96B01 352 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 TCF12Q99081 682 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 BARD1Q99728 777 aaKnown RBP10.68□□□□□ -0.7
CCDC47-206ENST00000584112 NDC1Q9BTX1 674 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 SYBUQ9NX95 663 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.68□□□□□ -0.7
CCDC47-206ENST00000584112 NDOR1Q9UHB4 597 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 SOX13Q9UN79 622 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 PPP2R2CQ9Y2T4 447 aa10.68□□□□□ -0.7
CCDC47-206ENST00000584112 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 IGHEP01854 428 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 OGNP20774 298 aaKnown RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 MAGP20916 626 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 FOLR3P41439 243 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 ARSFP54793 590 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 ADARP55265 1226 aaKnown RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 DCDP81605 110 aaKnown RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 GPS1Q13098 491 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 KCNJ11Q14654 390 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 ZC3H12BQ5HYM0 836 aaKnown RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 CRB2Q5IJ48 1285 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 MLIPQ5VWP3 458 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 KIAA0930Q6ICG6 404 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 MRGPRGQ86SM5 289 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 CEP97Q8IW35 865 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 DNAJC22Q8N4W6 341 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 ZNF655Q8N720 491 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 PRELID2Q8N945 189 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 LINC01555Q8NAE3 123 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 INPP5DQ92835 1189 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 MFSD3Q96ES6 412 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 PBKQ96KB5 322 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 GBP5Q96PP8 586 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 NAP1L3Q99457 506 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 FOXC2Q99958 501 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 MENTQ9BUN1 341 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 NUDT9Q9BW91 350 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 SPRTNQ9H040 489 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 EURLQ9NYK6 297 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 SAMD15Q9P1V8 674 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 IFT80Q9P2H3 777 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 TTC7AQ9ULT0 858 aaPredicted RBP10.67□□□□□ -0.7
CCDC47-206ENST00000584112 VPS9D1Q9Y2B5 631 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 JRKLQ9Y4A0 524 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 SCN2AQ99250 2005 aa10.67□□□□□ -0.7
CCDC47-206ENST00000584112 A0A1B0GUH1 482 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 MAGEB16A2A368 324 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 HCRTR1O43613 425 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 KLHL41O60662 606 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 CEACAM4O75871 244 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 C1orf105O95561 183 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 KRT14P02533 472 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 ESR1P03372 595 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 CBSLP0DN79 551 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 PIM1P11309 404 aaPredicted RBP10.66□□□□□ -0.7
CCDC47-206ENST00000584112 ARNTP27540 789 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 ATP5DP30049 168 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 OTX2P32243 289 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 CBSP35520 551 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 MAGEA6P43360 314 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 VPS41P49754 854 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 GRB7Q14451 532 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 SSPNQ14714 243 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 NAA25Q14CX7 972 aa10.66□□□□□ -0.7
CCDC47-206ENST00000584112 SF1Q15637 639 aaKnown RBP10.66□□□□□ -0.7
CCDC47-206ENST00000584112 TRIP13Q15645 432 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms