RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 ASPHQ12797 758 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 CDC16Q13042 620 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 SF1Q15637 639 aaKnown RBP9.19□□□□□ -0.94
RFFL-210ENST00000582308 PDK4Q16654 411 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 CFAP157Q5JU67 520 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 THEMIS2Q5TEJ8 643 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 KIAA1614Q5VZ46 1190 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 ICE2Q659A1 982 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 KLHL35Q6PF15 583 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 SPESP1Q6UW49 350 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 LCTLQ6UWM7 567 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 FRMD7Q6ZUT3 714 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 TMPRSS9Q7Z410 1059 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 TRIM73Q86UV7 250 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 LSMEM2Q8N112 164 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 OR2L3Q8NG85 312 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 TRPC4APQ8TEL6 797 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 CKAP2Q8WWK9 683 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 NEIL2Q969S2 332 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 SLC22A18Q96BI1 424 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 AHCYL2Q96HN2 611 aaKnown RBP9.19□□□□□ -0.94
RFFL-210ENST00000582308 CNDP1Q96KN2 507 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 MIPEPQ99797 713 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 NUDT22Q9BRQ3 303 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 HAUS8Q9BT25 410 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 C20orf27Q9GZN8 174 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 DRC3Q9H069 523 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 RAB33BQ9H082 229 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 PCBD2Q9H0N5 130 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 LRRN3Q9H3W5 708 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 EPB41L1Q9H4G0 881 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 MANSC1Q9H8J5 431 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 ZNF395Q9H8N7 513 aaPredicted RBP9.19□□□□□ -0.94
RFFL-210ENST00000582308 IPPKQ9H8X2 491 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 SEMA4BQ9NPR2 832 aaPredicted RBP9.19□□□□□ -0.94
RFFL-210ENST00000582308 EPHA6Q9UF33 1036 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 POMT2Q9UKY4 750 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 ATXN7L1Q9ULK2 861 aaPredicted RBP9.19□□□□□ -0.94
RFFL-210ENST00000582308 KCNE2Q9Y6J6 123 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 ADAMTS20P59510 1910 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 SEC16AO15027 2179 aa9.19□□□□□ -0.94
RFFL-210ENST00000582308 NTN3O00634 580 aaPredicted RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 POLR3GO15318 223 aaPredicted RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 DUX1O43812 170 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 NPHS1O60500 1241 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 H2AFYO75367 372 aaKnown RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 RPLP0P05388 317 aaKnown RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 GP1BAP07359 652 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 CHRNGP07510 517 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 NEFHP12036 1026 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 CDH1P12830 882 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 PVRP15151 417 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 PTPRBP23467 1997 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 GRK2P25098 689 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 MDH1P40925 334 aaKnown RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 PIK3CGP48736 1102 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 PPM1FP49593 454 aaPredicted RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 NAA20P61599 178 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 SH3BP2P78314 561 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 PCDH1Q08174 1060 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 BST1Q10588 318 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 TRAF3Q13114 568 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 PRKAA1Q13131 559 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 STX3Q13277 289 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 RCN2Q14257 317 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 RBBP7Q16576 425 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 SLC5A12Q1EHB4 618 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 ARL13AQ5H913 290 aaPredicted RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 CATSPEREQ5SY80 951 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 FAM219BQ5XKK7 198 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 ARMC6Q6NXE6 501 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 IRGCQ6NXR0 463 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 WDR74Q6RFH5 385 aaPredicted RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 ZNF574Q6ZN55 896 aaPredicted RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 SLCO4C1Q6ZQN7 724 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 FAM92BQ6ZTR7 304 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 GLRX5Q86SX6 157 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 C17orf64Q86WR6 236 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 DEFB124Q8NES8 71 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 ABHD11Q8NFV4 315 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 OR52B6Q8NGF0 335 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 PPP1R14CQ8TAE6 165 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 PPP4R1Q8TF05 950 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 DYDC1Q8WWB3 177 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 SLC5A11Q8WWX8 675 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 SREK1Q8WXA9 508 aaKnown RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 MAGEB18Q96M61 343 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 TGM7Q96PF1 710 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 MAP3K3Q99759 626 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 NOL11Q9H8H0 719 aaKnown RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 TNFRSF12AQ9NP84 129 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 SLC6A20Q9NP91 592 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 CUEDC1Q9NWM3 386 aaPredicted RBP9.18□□□□□ -0.94
RFFL-210ENST00000582308 TOR4AQ9NXH8 423 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 GPRC5BQ9NZH0 403 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 TMEM9Q9P0T7 183 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 ZNF225Q9UK10 706 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 KLHL20Q9Y2M5 609 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 DYRK1BQ9Y463 629 aa9.18□□□□□ -0.94
RFFL-210ENST00000582308 ANGPTL3Q9Y5C1 460 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms