RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 KLHL7Q8IXQ5 586 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 NDUFAF2Q8N183 169 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 OR52N5Q8NH56 324 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 C9orf43Q8TAL5 461 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 GRAPLQ8TC17 118 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 RAD54LQ92698 747 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 CORO2AQ92828 525 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 UHRF2Q96PU4 802 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 PANK2Q9BZ23 570 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 ALDH8A1Q9H2A2 487 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 TRPV4Q9HBA0 871 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 SIX2Q9NPC8 291 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 FAM207AQ9NSI2 230 aaPredicted RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 ADPRHL2Q9NX46 363 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 P4HTMQ9NXG6 502 aa4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 DDX43Q9NXZ2 648 aaKnown RBP4.25□□□□□ -1.73
SMCHD1-205ENST00000581383 TRAV24A0A0B4J272 114 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 ZNF197O14709 1029 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 SLC7A4O43246 635 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 SNX3O60493 162 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 DDHD2O94830 711 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 SERPINB2P05120 415 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 IGHV4-31P0DP07 118 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 SPP1P10451 314 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 DARSP14868 501 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 CASTP20810 708 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 CA6P23280 308 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 PSMB4P28070 264 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 CSTF2P33240 577 aaKnown RBP eCLIP4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 ALDH3A2P51648 485 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 MAZP56270 477 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 CLDN15P56746 228 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 TUBB4BP68371 445 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 SQLEQ14534 574 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 HERC3Q15034 1050 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 PTGISQ16647 500 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 MARK2Q7KZI7 788 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 DCUN1D3Q8IWE4 304 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 NOA1Q8NC60 698 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 OR10Q1Q8NGQ4 319 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 ZNF524Q96C55 264 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 BSCL2Q96G97 398 aaPredicted RBP4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 VMP1Q96GC9 406 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 ERO1AQ96HE7 468 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 OR2B2Q9GZK3 357 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 ZMYND12Q9H0C1 365 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 MINDY3Q9H8M7 445 aa4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 INTS9Q9NV88 658 aaKnown RBP4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 ZNF624Q9P2J8 865 aaPredicted RBP4.24□□□□□ -1.73
SMCHD1-205ENST00000581383 C5orf52A6NGY3 159 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 H0YAE9 185 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 PSMD14O00487 310 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 PRAF2O60831 178 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 PGLSO95336 258 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 SERPING1P05155 500 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 SUPT20HL2P0C7V6 817 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 STAG3L1P0CL83 205 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 KCNJ1P48048 391 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 MFAP3P55082 362 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 KRT83P78385 493 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 CDR2Q01850 454 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 GPR17Q13304 367 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 TAZQ16635 292 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 KIAA1644Q3SXP7 199 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 FAM174BQ3ZCQ3 159 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 SLC25A53Q5H9E4 307 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 SLC35D3Q5M8T2 416 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 C20orf194Q5TEA3 1177 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 OR4A47Q6IF82 309 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 MSANTD1Q6ZTZ1 278 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 SLC16A9Q7RTY1 509 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 APCDD1Q8J025 514 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 OR10V1Q8NGI7 309 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 GDAP1Q8TB36 358 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 FBXO17Q96EF6 278 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 GPATCH1Q9BRR8 931 aaKnown RBP4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 SHARPINQ9H0F6 387 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 COPS7BQ9H9Q2 264 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 ERAP1Q9NZ08 941 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 FLRT3Q9NZU0 649 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 ARMCX3Q9UH62 379 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 KCNJ14Q9UNX9 436 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 TNNQ9UQP3 1299 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 ZFP37Q9Y6Q3 630 aaPredicted RBP4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 HEG1Q9ULI3 1381 aa4.23□□□□□ -1.73
SMCHD1-205ENST00000581383 IGHV4-61A0A0C4DH41 118 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 A0A0G2JLW4 131 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 IFIT3O14879 490 aaKnown RBP4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 FCGR3BO75015 233 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 IGHV4-59P01825 116 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 RLN1P04808 185 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 CD48P09326 243 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 ITGA3P26006 1051 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 ALDH1B1P30837 517 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 TIMP3P35625 211 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 YWHAHQ04917 246 aaPredicted RBP4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 NFE2L1Q14494 772 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 E2F5Q15329 346 aa4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 TWISTNBQ3B726 338 aaPredicted RBP4.22□□□□□ -1.73
SMCHD1-205ENST00000581383 CYB5D1Q6P9G0 228 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms