RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 IRAK4Q9NWZ3 460 aa17.91■□□□□ 0.46
PPP4R1-215ENST00000580182 KLK4Q9Y5K2 254 aa17.91■□□□□ 0.46
PPP4R1-215ENST00000580182 PCM1Q15154 2024 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 A0A0J9YVX5 310 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 ZNF839A8K0R7 811 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 ATXN7O15265 892 aaPredicted RBP17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 ZSCAN9O15535 394 aaPredicted RBP17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 KLK3P07288 261 aaPredicted RBP17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 FURINP09958 794 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 ZNF37AP17032 561 aaPredicted RBP17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 TBR1Q16650 682 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 ZXDCQ2QGD7 858 aaPredicted RBP17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 TAF1BQ53T94 588 aaPredicted RBP17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 FAM69BQ5VUD6 431 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 ICE2Q659A1 982 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 ZNF385CQ66K41 422 aaPredicted RBP17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 FRMPD2BQ6IN97 320 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 PPM1NQ8N819 430 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 IFT81Q8WYA0 676 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 CCDC138Q96M89 665 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 RBBP8Q99708 897 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 CPNE1Q99829 537 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 ATG10Q9H0Y0 220 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 SYNPO2LQ9H987 977 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 DHCR7Q9UBM7 475 aaKnown RBP17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 PCDHGA6Q9Y5G7 932 aa17.9■□□□□ 0.46
PPP4R1-215ENST00000580182 LOC105369274A0A096LPK9 316 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 LOC102723532A0A0G2JNH3 316 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 OR2A25A4D2G3 310 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 CDC7O00311 574 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 CAPN1P07384 714 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 ECHS1P30084 290 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 TBPL1P62380 186 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 PRDX1Q06830 199 aaKnown RBP17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 CDC20Q12834 499 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 LY6DQ14210 128 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 ERV3-1Q14264 604 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 GLE1Q53GS7 698 aaKnown RBP17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 ZC3H12BQ5HYM0 836 aaKnown RBP17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 THEMIS2Q5TEJ8 643 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 RHBDD2Q6NTF9 364 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 FBXO42Q6P3S6 717 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 TLDC1Q6P9B6 456 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 OR4N4Q8N0Y3 316 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 CEP112Q8N8E3 955 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 PDLIM5Q96HC4 596 aaKnown RBP17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 SELENOSQ9BQE4 189 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 UNKQ9C0B0 810 aaKnown RBP17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 ACTL8Q9H568 366 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 CUEDC1Q9NWM3 386 aaPredicted RBP17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 TXNDC16Q9P2K2 825 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 KCND3Q9UK17 655 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 SH2B3Q9UQQ2 575 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 AP1M2Q9Y6Q5 423 aa17.89■□□□□ 0.45
PPP4R1-215ENST00000580182 SMG1Q96Q15 3661 aaKnown RBP17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 ANKRD12Q6UB98 2062 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 NPEPPSL1A6NEC2 478 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 C21orf140B9A014 251 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 CREG1O75629 220 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 WISP3O95389 354 aaPredicted RBP17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 PRB1P04280 392 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 HBQ1P09105 142 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 GP5P40197 560 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 GCGRP47871 477 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 VSX2P58304 361 aaPredicted RBP17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 NFKB2Q00653 900 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 NAE1Q13564 534 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 AGTRAPQ6RW13 159 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 FAM198BQ6UWH4 519 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 SBSNQ6UWP8 590 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 RNF44Q7L0R7 432 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 PAQR7Q86WK9 346 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 SPATA6LQ8N4H0 392 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 ENDOVQ8N8Q3 282 aaKnown RBP17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 LRRN4CLQ8ND94 238 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 SLC39A7Q92504 469 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 ALKBH8Q96BT7 664 aaKnown RBP17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 MED8Q96G25 268 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 ZNF285Q96NJ3 590 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 PLCD4Q9BRC7 762 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 GPAMQ9HCL2 828 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 CCDC177Q9NQR7 707 aaPredicted RBP17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 UTP6Q9NYH9 597 aaKnown RBP17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 NINJ2Q9NZG7 142 aa17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 FARSAQ9Y285 508 aaKnown RBP17.88■□□□□ 0.45
PPP4R1-215ENST00000580182 FER1L5A0AVI2 2057 aa17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 PHGDHO43175 533 aaKnown RBP17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 GUCA1CO95843 209 aa17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 ITGB2P05107 769 aa17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 HIST1H2AGP0C0S8 130 aaPredicted RBP17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 HIST1H2ADP20671 130 aa17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 PTPN4P29074 926 aa17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 STX2P32856 288 aa17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 GMPRP36959 345 aa17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 SLC12A2P55011 1212 aa17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 RPS15P62841 145 aaKnown RBP17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 POU4F1Q01851 419 aa17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 USP10Q14694 798 aaKnown RBP17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 SLC9A5Q14940 896 aa17.87■□□□□ 0.45
PPP4R1-215ENST00000580182 PPP1R3AQ16821 1122 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms