RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ALDOCP09972 364 aaKnown RBP17.92■□□□□ 0.46
PRKCA-203ENST00000578063 C1GALT1C1LP0DN25 315 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 IDO1P14902 403 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 PIK3R1P27986 724 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 SHMT2P34897 504 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 LAPTM5Q13571 262 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 KIR2DS5Q14953 304 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 GSTA3Q16772 222 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 SMU1Q2TAY7 513 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 SGO1Q5FBB7 561 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 IYDQ6PHW0 289 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 NXPE4Q6UWF7 544 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 C17orf64Q86WR6 236 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 SFRP1Q8N474 314 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 LMNTD1Q8N9Z9 388 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 LINC01555Q8NAE3 123 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 ZFPM2Q8WW38 1151 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 REPS1Q96D71 796 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 FARSBQ9NSD9 589 aaKnown RBP17.92■□□□□ 0.46
PRKCA-203ENST00000578063 POT1Q9NUX5 634 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 GIMAP2Q9UG22 337 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 TAC3Q9UHF0 121 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 CCL27Q9Y4X3 112 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 A0A1W2PPV9 198 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 BCAT2O15382 392 aaPredicted RBP17.92■□□□□ 0.46
PRKCA-203ENST00000578063 PDYNP01213 254 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 VARSP26640 1264 aaKnown RBP17.92■□□□□ 0.46
PRKCA-203ENST00000578063 SLC19A1P41440 591 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 AFF3P51826 1226 aaKnown RBP17.92■□□□□ 0.46
PRKCA-203ENST00000578063 MNAT1P51948 309 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 HERC3Q15034 1050 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 ELOCQ15369 112 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 PRRT3Q5FWE3 981 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 C6orf136Q5SQH8 315 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 ARMCX6Q7L4S7 300 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 TRIM48Q8IWZ4 208 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 C2orf73Q8N5S3 287 aaPredicted RBP17.92■□□□□ 0.46
PRKCA-203ENST00000578063 FNDC5Q8NAU1 212 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 SH2B3Q9UQQ2 575 aa17.92■□□□□ 0.46
PRKCA-203ENST00000578063 EML5Q05BV3 1969 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 RSL1D1O76021 490 aaKnown RBP17.91■□□□□ 0.46
PRKCA-203ENST00000578063 HSD3B1P14060 373 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 EZRP15311 586 aaKnown RBP17.91■□□□□ 0.46
PRKCA-203ENST00000578063 XRCC1P18887 633 aaPredicted RBP17.91■□□□□ 0.46
PRKCA-203ENST00000578063 HSD3B2P26439 372 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 MRPL19P49406 292 aaKnown RBP17.91■□□□□ 0.46
PRKCA-203ENST00000578063 C21orf59P57076 290 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 CSTF3Q12996 717 aaKnown RBP17.91■□□□□ 0.46
PRKCA-203ENST00000578063 MAD2L1Q13257 205 aaPredicted RBP17.91■□□□□ 0.46
PRKCA-203ENST00000578063 SLBPQ14493 270 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRKCA-203ENST00000578063 HIST2H2ACQ16777 129 aaPredicted RBP17.91■□□□□ 0.46
PRKCA-203ENST00000578063 AP5B1Q2VPB7 878 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 CATSPEREQ5SY80 951 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 HIST2H2AA3Q6FI13 130 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 MED27Q6P2C8 311 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 WDR20Q8TBZ3 569 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 GAB3Q8WWW8 586 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 LCN9Q8WX39 176 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 UBE2E3Q969T4 207 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 ACPTQ9BZG2 426 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 LRMDAQ9H2I8 198 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 XKR8Q9H6D3 395 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 PELI2Q9HAT8 420 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 OR6C2Q9NZP2 312 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 PCDHB11Q9Y5F2 797 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 TECTAO75443 2155 aa17.91■□□□□ 0.46
PRKCA-203ENST00000578063 ANKRD65E5RJM6 399 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 NPIPB8E9PQR5 432 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 CELA2BP08218 269 aaPredicted RBP17.9■□□□□ 0.46
PRKCA-203ENST00000578063 CDH1P12830 882 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 PRPH2P23942 346 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 EMX2Q04743 252 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 CSTF1Q05048 431 aaKnown RBP17.9■□□□□ 0.46
PRKCA-203ENST00000578063 ACTN3Q08043 901 aaPredicted RBP17.9■□□□□ 0.46
PRKCA-203ENST00000578063 MAPRE2Q15555 327 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 TEAD4Q15561 434 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 KIF19Q2TAC6 998 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 LYSMD4Q5XG99 296 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 AMIGO1Q86WK6 493 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 MIER2Q8N344 545 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 KLHL29Q96CT2 875 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 NRTNQ99748 197 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 ACAT2Q9BWD1 397 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 AIG1Q9NVV5 245 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 GEMIN8Q9NWZ8 242 aaKnown RBP17.9■□□□□ 0.46
PRKCA-203ENST00000578063 SPASTQ9UBP0 616 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 RRP15Q9Y3B9 282 aaKnown RBP17.9■□□□□ 0.46
PRKCA-203ENST00000578063 BDP1A6H8Y1 2624 aa17.9■□□□□ 0.46
PRKCA-203ENST00000578063 PRAMEF33A0A0G2JMD5 474 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 PIPSLA2A3N6 862 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 PSMD12O00232 456 aaPredicted RBP17.89■□□□□ 0.46
PRKCA-203ENST00000578063 DNAJC8O75937 253 aaPredicted RBP17.89■□□□□ 0.46
PRKCA-203ENST00000578063 VIPP01282 170 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 THRAP10827 490 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 COX4I1P13073 169 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 CXCR2P25025 360 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 PTPN4P29074 926 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 ACADVLP49748 655 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 NEK2P51955 445 aa17.89■□□□□ 0.46
PRKCA-203ENST00000578063 HNRNPKP61978 463 aaKnown RBP eCLIP17.89■□□□□ 0.463e-7■■■■□ 24
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms