RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SLC22A18Q96BI1 424 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 SPACA9Q96E40 222 aaPredicted RBP1.99□□□□□ -2.09
TOP2A-202ENST00000577541 CYYR1Q96J86 154 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 FAM20AQ96MK3 541 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 RAB11FIP5Q9BXF6 653 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 Q9H8V8 135 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 ANKZF1Q9H8Y5 726 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 PPANQ9NQ55 473 aaKnown RBP1.99□□□□□ -2.09
TOP2A-202ENST00000577541 SLC35C2Q9NQQ7 365 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 TBC1D22BQ9NU19 505 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 PANK4Q9NVE7 773 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 PRMT7Q9NVM4 692 aaPredicted RBP1.99□□□□□ -2.09
TOP2A-202ENST00000577541 TEX10Q9NXF1 929 aaPredicted RBP1.99□□□□□ -2.09
TOP2A-202ENST00000577541 DPP3Q9NY33 737 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 THEGQ9P2T0 379 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 NRBP1Q9UHY1 535 aa1.99□□□□□ -2.09
TOP2A-202ENST00000577541 ZNF215Q9UL58 517 aaPredicted RBP1.99□□□□□ -2.09
TOP2A-202ENST00000577541 PTRH2Q9Y3E5 179 aaKnown RBP1.99□□□□□ -2.09
TOP2A-202ENST00000577541 TRBV5-5A0A0J9YX44 114 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 ARPC2O15144 300 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 EPHB6O15197 1021 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 TEX28O15482 410 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 AHCYL1O43865 530 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 PGM3O95394 542 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 TRUB2O95900 331 aaKnown RBP1.98□□□□□ -2.09
TOP2A-202ENST00000577541 LINGO3P0C6S8 592 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 ALOX12P18054 663 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 PRKACGP22612 351 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 CSTF2P33240 577 aaKnown RBP eCLIP1.98□□□□□ -2.09
TOP2A-202ENST00000577541 HNRNPKP61978 463 aaKnown RBP eCLIP1.98□□□□□ -2.09
TOP2A-202ENST00000577541 GCNT1Q02742 428 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 TOMM20Q15388 145 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 LCN1P1Q5VSP4 162 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 DMKNQ6E0U4 476 aaPredicted RBP1.98□□□□□ -2.09
TOP2A-202ENST00000577541 TMEM211Q6ICI0 200 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 C11orf63Q6NUN7 778 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 NOTUMQ6P988 496 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 ZFAND4Q86XD8 727 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 MARCH9Q86YJ5 346 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 POM121L12Q8N7R1 296 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.98□□□□□ -2.09
TOP2A-202ENST00000577541 MCUQ8NE86 351 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 CENPTQ96BT3 561 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 SPDL1Q96EA4 605 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 C4orf45Q96LM5 186 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 C1orf147Q96MC9 270 aaPredicted RBP1.98□□□□□ -2.09
TOP2A-202ENST00000577541 AGAP4Q96P64 663 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 LPAR4Q99677 370 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 NKX3-1Q99801 234 aaPredicted RBP1.98□□□□□ -2.09
TOP2A-202ENST00000577541 URM1Q9BTM9 101 aaKnown RBP1.98□□□□□ -2.09
TOP2A-202ENST00000577541 HOXD1Q9GZZ0 328 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 PARLQ9H300 379 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 TBC1D17Q9HA65 648 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 GNB4Q9HAV0 340 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.98□□□□□ -2.09
TOP2A-202ENST00000577541 CTSZQ9UBR2 303 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 TBC1D29Q9UFV1 150 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 VPS28Q9UK41 221 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 TSPAN16Q9UKR8 245 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 RPS6KL1Q9Y6S9 549 aa1.98□□□□□ -2.09
TOP2A-202ENST00000577541 RSF1Q96T23 1441 aaPredicted RBP1.98□□□□□ -2.09
TOP2A-202ENST00000577541 PASKQ96RG2 1323 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 A0A087WUV0 522 aaPredicted RBP1.97□□□□□ -2.09
TOP2A-202ENST00000577541 FSD2A1L4K1 749 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 MAGEC1O60732 1142 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 DDHD2O94830 711 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 SMIM18P0DKX4 95 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 PORP16435 677 aaPredicted RBP1.97□□□□□ -2.09
TOP2A-202ENST00000577541 IL4RP24394 825 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 EDNRAP25101 427 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 MPZP25189 248 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 PIK3R1P27986 724 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 GCH1P30793 250 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 MTHFRP42898 656 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 TSFMP43897 325 aaKnown RBP1.97□□□□□ -2.09
TOP2A-202ENST00000577541 RPL21P46778 160 aaKnown RBP1.97□□□□□ -2.09
TOP2A-202ENST00000577541 LIMK2P53671 638 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 CLNS1AP54105 237 aaKnown RBP1.97□□□□□ -2.09
TOP2A-202ENST00000577541 HSPB3Q12988 150 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 CHAF1BQ13112 559 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 CUL4AQ13619 759 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 MTF1Q14872 753 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 EXT1Q16394 746 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 SLC25A30Q5SVS4 291 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 BRINP3Q76B58 766 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 SLC47A2Q86VL8 602 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 KRTAP11-1Q8IUC1 163 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 LINC00346Q8IVM7 164 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 MMD2Q8IY49 270 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 SLC39A11Q8N1S5 342 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 FAM89BQ8N5H3 189 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 THAP8Q8NA92 274 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 GPRC5AQ8NFJ5 357 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 TSPAN14Q8NG11 270 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 OR5T2Q8NGG2 359 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 OR2L2Q8NH16 312 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 MIPOL1Q8TD10 442 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 PIGBQ92521 554 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 TMCO6Q96DC7 493 aa1.97□□□□□ -2.09
TOP2A-202ENST00000577541 SLC45A3Q96JT2 553 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms