RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 SLC26A11Q86WA9 606 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 AMIGO1Q86WK6 493 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 GPATCH11Q8N954 259 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 AVL9Q8NBF6 648 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 UHMK1Q8TAS1 419 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 ANKRD49Q8WVL7 239 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 LCN9Q8WX39 176 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 INPP5DQ92835 1189 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 VPS39Q96JC1 886 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 MAP3K3Q99759 626 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 TSSK1BQ9BXA7 367 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 RAB33BQ9H082 229 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 KLHL25Q9H0H3 589 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 TRIT1Q9H3H1 467 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 POLR1BQ9H9Y6 1135 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 FOXJ2Q9P0K8 574 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 DKK4Q9UBT3 224 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 EPHA6Q9UF33 1036 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 KLHL20Q9Y2M5 609 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 HEBP2Q9Y5Z4 205 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 COLEC10Q9Y6Z7 277 aa9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 SMG1Q96Q15 3661 aaKnown RBP9.15□□□□□ -0.94
NPLOC4-219ENST00000576713 A0A1W2PPV9 198 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 SRRM3A6NNA2 597 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 CDRT15L2A8MXV6 281 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 GFYI3L273 518 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PLD2O14939 933 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PFDN6O15212 129 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PRICKLE3O43900 615 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 VPS26AO75436 327 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 TNFSF15O95150 251 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 ACSL3O95573 720 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 CHRM5P08912 532 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 ST6GAL1P15907 406 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 SAT1P21673 171 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PSMB5P28074 263 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 NDUFS1P28331 727 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PRDX3P30048 256 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 ATP5DP30049 168 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PLOD1Q02809 727 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 BMPR2Q13873 1038 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 ZIC1Q15915 447 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 CLPPQ16740 277 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PHKG1Q16816 387 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 DNTTIP2Q5QJE6 756 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 MBOAT1Q6ZNC8 495 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PRSS42Q7Z5A4 293 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PROSER1Q86XN7 944 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 DCUN1D3Q8IWE4 304 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 ARMC10Q8N2F6 343 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 FBXO39Q8N4B4 442 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 SPATA6LQ8N4H0 392 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PPM1NQ8N819 430 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PPFIBP2Q8ND30 876 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 WDR36Q8NI36 951 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 SKA2Q8WVK7 121 aaPredicted RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 ZFPM2Q8WW38 1151 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 ASB11Q8WXH4 323 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 KLHL6Q8WZ60 621 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 LINGO1Q96FE5 620 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 ELMO2Q96JJ3 720 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC46A1Q96NT5 459 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 OR2A14Q96R47 310 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PKP4Q99569 1192 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 RBBP8Q99708 897 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 CTRCQ99895 268 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 FUT8Q9BYC5 575 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 UNKQ9C0B0 810 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 SRMSQ9H3Y6 488 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 RHOJQ9H4E5 214 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 EPB41L1Q9H4G0 881 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 ZNF768Q9H5H4 540 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 SYNPO2LQ9H987 977 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 SEMA5BQ9P283 1151 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 KLHL42Q9P2K6 505 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PISDQ9UG56 409 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 TRMT6Q9UJA5 497 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 POMT2Q9UKY4 750 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 VWA7Q9Y334 891 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 PCDHGA8Q9Y5G5 932 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 COMMD10Q9Y6G5 202 aa9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 SPENQ96T58 3664 aaKnown RBP9.14□□□□□ -0.95
NPLOC4-219ENST00000576713 GSAPA4D1B5 854 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 SLC9B1P1A6NJY1 282 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 EFCAB7A8K855 629 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 RASGRF2O14827 1237 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 KPNA5O15131 536 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 PHGDHO43175 533 aaKnown RBP9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 RASSF9O75901 435 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 GSTA2P09210 222 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 ANKRD34CP0C6C1 535 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 EBLN1P0CF75 366 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 MPC1LP0DKB6 136 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 ERGP11308 486 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 FOLR1P15328 257 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 UGT2B7P16662 529 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 ZNF37AP17032 561 aaPredicted RBP9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 CD9P21926 228 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 GCAP28676 217 aa9.13□□□□□ -0.95
NPLOC4-219ENST00000576713 CSRP3P50461 194 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms