RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	ATE1	O95260	518 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	SP1	P08047	785 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	MYBL1	P10243	752 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	GJC1	P36383	396 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	KIR2DL3	P43628	341 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	ARSE	P51690	589 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	VSX2	P58304	361 aa	Predicted RBP	13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	OC90	Q02509	493 aa	Predicted RBP	13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	PMPCA	Q10713	525 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	FASTK	Q14296	549 aa	Known RBP	13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	MEP1A	Q16819	746 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	SIRPB2	Q5JXA9	342 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	WASHC2D	Q5SRD0	308 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	SLC25A25	Q6KCM7	469 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	ACAD11	Q709F0	780 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	MAP7D3	Q8IWC1	876 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	AMER2	Q8N7J2	671 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	NIPA2	Q8N8Q9	360 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	ULK4	Q96C45	1275 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	IMMP1L	Q96LU5	166 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	ZNF285	Q96NJ3	590 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	COPS8	Q99627	209 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	SYT11	Q9BT88	431 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	THAP2	Q9H0W7	228 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	GLOD4	Q9HC38	313 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	LUC7L	Q9NQ29	371 aa	Known RBP	13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	TRPC4	Q9UBN4	977 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	IP6K2	Q9UHH9	426 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	PLAGL1	Q9UM63	463 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737	FAM169A	Q9Y6X4	670 aa		13.05	□□□□□ -0.32
SMG1-213	ENST00000567737		A0A0A6YYK5	440 aa	Predicted RBP	13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	LOC285095	A0A1B0GVY8	99 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	PRPF4	O43172	522 aa	Known RBP eCLIP	13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	SRPX2	O60687	465 aa	Predicted RBP	13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	MED26	O95402	600 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	TPBGL	P0DKB5	382 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	GZMA	P12544	262 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	CHRNA4	P43681	627 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	DLX5	P56178	289 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	WNT3A	P56704	352 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	NKX6-1	P78426	367 aa	Predicted RBP	13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	PTPRCAP	Q14761	206 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	PDK2	Q15119	407 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	TAZ	Q16635	292 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	MAPKAPK3	Q16644	382 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	MUM1	Q2TAK8	710 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	BTBD16	Q32M84	506 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	ZNF658B	Q4V348	819 aa	Predicted RBP	13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	SHE	Q5VZ18	495 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	FIGLA	Q6QHK4	219 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	PQLC3	Q8N755	202 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	SIMC1	Q8NDZ2	872 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	SLC22A18	Q96BI1	424 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	KCNK13	Q9HB14	408 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	FAM153A	Q9UHL3	310 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	HRH3	Q9Y5N1	445 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737	ALG6	Q9Y672	507 aa		13.04	□□□□□ -0.32
SMG1-213	ENST00000567737		A6NNC1	897 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	TFEC	O14948	347 aa	Predicted RBP	13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	CDC40	O60508	579 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	AP2A1	O95782	977 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	EPO	P01588	193 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	CDK11B	P21127	795 aa	Known RBP	13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	PEX19	P40855	299 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	ST13	P50502	369 aa	Known RBP	13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	NUP107	P57740	925 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	KRT31	Q15323	416 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	RNFT1	Q5M7Z0	435 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	FBXW10	Q5XX13	1052 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	TMEM205	Q6UW68	189 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	IRF2BP2	Q7Z5L9	587 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	PAQR7	Q86WK9	346 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	KRTAP1-3	Q8IUG1	177 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	CRLF3	Q8IUI8	442 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	RPRML	Q8N4K4	120 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	OR5K2	Q8NHB8	316 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	METTL21A	Q8WXB1	218 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	FAF2	Q96CS3	445 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	COX4I2	Q96KJ9	171 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	OLFM1	Q99784	485 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	FKBPL	Q9UIM3	349 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	CDC14A	Q9UNH5	594 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	HEY1	Q9Y5J3	304 aa		13.03	□□□□□ -0.32
SMG1-213	ENST00000567737	GABRR3	A8MPY1	467 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	FFAR3	O14843	346 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	GPR42	O15529	346 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	PRMT3	O60678	531 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	SEC24D	O94855	1032 aa	Predicted RBP	13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	GSTM1	P09488	218 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	C8orf89	P0DMQ9	161 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	GSTM4	Q03013	218 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	SNTB1	Q13884	538 aa	Known RBP	13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	SLC1A5	Q15758	541 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	DPCR1	Q3MIW9	517 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	TEX44	Q53QW1	395 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	PLAG1	Q6DJT9	500 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	H3F3C	Q6NXT2	135 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	UNC5D	Q6UXZ4	953 aa		13.02	□□□□□ -0.33
SMG1-213	ENST00000567737	PHC2	Q8IXK0	858 aa		13.02	□□□□□ -0.33

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