RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 ALBP02768 609 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 PIM1P11309 404 aaPredicted RBP17.71■□□□□ 0.43
CLN6-204ENST00000564752 PKMP14618 531 aaKnown RBP17.71■□□□□ 0.43
CLN6-204ENST00000564752 MMP11P24347 488 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 LONRF1Q17RB8 773 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 TCTE1Q5JU00 501 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 YOD1Q5VVQ6 348 aaPredicted RBP17.71■□□□□ 0.43
CLN6-204ENST00000564752 HIST2H2BCQ6DN03 193 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 SLCO2A1Q92959 643 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 RAD51AP1Q96B01 352 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 ZNF285Q96NJ3 590 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 NAPGQ99747 312 aaPredicted RBP17.71■□□□□ 0.43
CLN6-204ENST00000564752 SLC26A1Q9H2B4 701 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 CCDC68Q9H2F9 335 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 WDR54Q9H977 334 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 CUTCQ9NTM9 273 aa17.71■□□□□ 0.43
CLN6-204ENST00000564752 C20orf96Q9NUD7 363 aaPredicted RBP17.71■□□□□ 0.43
CLN6-204ENST00000564752 DNALI1O14645 258 aaPredicted RBP17.7■□□□□ 0.42
CLN6-204ENST00000564752 DSCR3O14972 297 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 C1orf105O95561 183 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 RNF224P0DH78 156 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 MCM3P25205 808 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 ATP5DP30049 168 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 CCNFP41002 786 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 SLC1A2P43004 574 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 AIMP2Q13155 320 aaKnown RBP17.7■□□□□ 0.42
CLN6-204ENST00000564752 GRM7Q14831 915 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 NKG7Q16617 165 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 CRB2Q5IJ48 1285 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 PCGF5Q86SE9 256 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 DENND6AQ8IWF6 608 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 LMNTD2Q8IXW0 634 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 AGGF1Q8N302 714 aaeCLIP17.7■□□□□ 0.42
CLN6-204ENST00000564752 ZADH2Q8N4Q0 377 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 CISD2Q8N5K1 135 aaKnown RBP17.7■□□□□ 0.42
CLN6-204ENST00000564752 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLN6-204ENST00000564752 PRR7Q8TB68 274 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 CALML6Q8TD86 181 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 MAGEC3Q8TD91 643 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 TM9SF4Q92544 642 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 SIGLEC10Q96LC7 697 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 ZBTB20Q9HC78 741 aaPredicted RBP17.7■□□□□ 0.42
CLN6-204ENST00000564752 FBXO6Q9NRD1 293 aaPredicted RBP17.7■□□□□ 0.42
CLN6-204ENST00000564752 ASF1BQ9NVP2 202 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 PCYOX1Q9UHG3 505 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 PYCARDQ9ULZ3 195 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 KLK4Q9Y5K2 254 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 UNC79Q9P2D8 2635 aa17.7■□□□□ 0.42
CLN6-204ENST00000564752 FITM1A5D6W6 292 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 CBX6O95503 412 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 F7P08709 466 aaPredicted RBP17.69■□□□□ 0.42
CLN6-204ENST00000564752 PGAM1P18669 254 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 CTBP1Q13363 440 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 GBX1Q14549 363 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 TTLL9Q3SXZ7 439 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 CCSMST1Q4G0I0 132 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 Q6ZS92 163 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 COX15Q7KZN9 410 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 KLHL7Q8IXQ5 586 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 HMGCLL1Q8TB92 370 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.69■□□□□ 0.42
CLN6-204ENST00000564752 INPP5DQ92835 1189 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 RUNDC3BQ96NL0 473 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 SPSB2Q99619 263 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 SELENOSQ9BQE4 189 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 FAM167BQ9BTA0 163 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 ILKAPQ9H0C8 392 aaPredicted RBP17.69■□□□□ 0.42
CLN6-204ENST00000564752 CDC23Q9UJX2 597 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 FBXL4Q9UKA2 621 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 SAR1BQ9Y6B6 198 aa17.69■□□□□ 0.42
CLN6-204ENST00000564752 SOCS6O14544 535 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 SRPX2O60687 465 aaPredicted RBP17.68■□□□□ 0.42
CLN6-204ENST00000564752 CTSVO60911 334 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 DDAH2O95865 285 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 ITGA3P26006 1051 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 NR6A1Q15406 480 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 FAM214AQ32MH5 1076 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 ACSBG2Q5FVE4 666 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 PRAMEF13Q5VWM6 474 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 KCNMB4Q86W47 210 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 TTC29Q8NA56 475 aaPredicted RBP17.68■□□□□ 0.42
CLN6-204ENST00000564752 BARD1Q99728 777 aaKnown RBP17.68■□□□□ 0.42
CLN6-204ENST00000564752 SLC6A20Q9NP91 592 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 SPATA7Q9P0W8 599 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 CCDC88CQ9P219 2028 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 FAM169AQ9Y6X4 670 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 ANKRD12Q6UB98 2062 aa17.68■□□□□ 0.42
CLN6-204ENST00000564752 HIVEP3Q5T1R4 2406 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 KRT87PA6NCN2 255 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 MATN4O95460 622 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 PSMB5P28074 263 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 VSX2P58304 361 aaPredicted RBP17.67■□□□□ 0.42
CLN6-204ENST00000564752 MPP1Q00013 466 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 DR1Q01658 176 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 DHX9Q08211 1270 aaKnown RBP17.67■□□□□ 0.42
CLN6-204ENST00000564752 CRYMQ14894 314 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 KLHL38Q2WGJ6 581 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 HSP90AA5PQ58FG0 334 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 WASHC2DQ5SRD0 308 aa17.67■□□□□ 0.42
CLN6-204ENST00000564752 KIRREL2Q6UWL6 708 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms