RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 FBXO2Q9UK22 296 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 ABT1Q9ULW3 272 aaKnown RBP2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 WIPI2Q9Y4P8 454 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 R4GN57 208 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 LOC100509620A0A075B734 347 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 A0A087WUV0 522 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 NEMP2A6NFY4 417 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 SHISA7A6NL88 538 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 A8MXK9 166 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 H0YAE9 185 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 IGHV2-70P01814 119 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 IL4RP24394 825 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 PDHA2P29803 388 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 CDC25CP30307 473 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 STAT2P52630 851 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 IRX4P78413 519 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 TMEM132DQ14C87 1099 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 HIGD2BQ4VC39 106 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 NOTUMQ6P988 496 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 LGI2Q8N0V4 545 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 OR10S1Q8NGN2 331 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 OR10Q1Q8NGQ4 319 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZNF622Q969S3 477 aaKnown RBP eCLIP2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 NXNL1Q96CM4 212 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 SPACA9Q96E40 222 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 OVOL2Q9BRP0 275 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 HOXD1Q9GZZ0 328 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 GHITMQ9H3K2 345 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 MYNNQ9NPC7 610 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 CHST11Q9NPF2 352 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 CTSZQ9UBR2 303 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZNF69Q9UC07 566 aa2.63□□□□□ -1.99
HMGB1P33-201ENST00000563485 PRRC2AP48634 2157 aaKnown RBP2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 TFECO14948 347 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 ENTPD3O75355 529 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 HOXD4P09016 255 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 PRKAR1AP10644 381 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 BCL3P20749 454 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 OXTRP30559 389 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 PTGER4P35408 488 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 HOXD13P35453 343 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 ETV5P41161 510 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 SOX3P41225 446 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 DNA2P51530 1060 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 MAPK12P53778 367 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 TAB1Q15750 504 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 FAM189A2Q15884 450 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 PHKG1Q16816 387 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 C15orf59Q2T9L4 293 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 MCMDC2Q4G0Z9 681 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 SEL1L3Q68CR1 1132 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 MFSD12Q6NUT3 480 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZFAND4Q86XD8 727 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 MINDY1Q8N5J2 469 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 KLHDC1Q8N7A1 406 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 C2orf48Q96LS8 159 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 TIGD1Q96MW7 591 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 LGMNQ99538 433 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 MAP3K3Q99759 626 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 HAUS2Q9NVX0 235 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 STK26Q9P289 416 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 CRNNQ9UBG3 495 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 ARID2Q68CP9 1835 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 ARID4BQ4LE39 1312 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
HMGB1P33-201ENST00000563485 TRBV5-5A0A0J9YX44 114 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 FSD2A1L4K1 749 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 SHISA9B4DS77 424 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 G3V2L1 256 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 CEACAM4O75871 244 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 CSH1P0DML2 217 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 CSH2P0DML3 217 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 GP1BBP13224 206 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 SAT1P21673 171 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 CD27P26842 260 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 CAPGP40121 348 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 MTHFRP42898 656 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 RXRGP48443 463 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 CLCN4P51793 760 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 MYL7Q01449 175 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 KLC1Q07866 573 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 HSPB3Q12988 150 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 CHAF1BQ13112 559 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 SNAPC1Q16533 368 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 NTRK2Q16620 822 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 C15orf32Q32M92 178 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZNF841Q6ZN19 808 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZER1Q7Z7L7 766 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 SLC25A42Q86VD7 318 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 FAM131BQ86XD5 332 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 APPL2Q8NEU8 664 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 OR7A2PQ8NGA2 310 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 TOMM40LQ969M1 308 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 SLC22A18Q96BI1 424 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 SEPHS2Q99611 448 aa2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 BARD1Q99728 777 aaKnown RBP2.61□□□□□ -1.99
HMGB1P33-201ENST00000563485 TEX12Q9BXU0 123 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms