RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 JUPP14923 745 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 VAMP1P23763 118 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 HSD3B2P26439 372 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 PIK3R1P27986 724 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 PRDX3P30048 256 aaKnown RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 BDKRB1P46663 353 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 CLCNKAP51800 687 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 PFN3P60673 137 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 TBPL1P62380 186 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 IRF8Q02556 426 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 TFF2Q03403 129 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 HYAL2Q12891 473 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 CSTF3Q12996 717 aaKnown RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 NAE1Q13564 534 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 LAPTM5Q13571 262 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 CYLC2Q14093 348 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 FASTKQ14296 549 aaKnown RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 KIF19Q2TAC6 998 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 C18orf21Q32NC0 220 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 PAGE2BQ5JRK9 111 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 ZNF468Q5VIY5 522 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 SYT9Q86SS6 491 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 MYLK4Q86YV6 388 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 DCP2Q8IU60 420 aaKnown RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 LILRA3Q8N6C8 439 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 MAFAQ8NHW3 353 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 SETD7Q8WTS6 366 aaKnown RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 TSPEARQ8WU66 669 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 UBE2E3Q969T4 207 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 MED8Q96G25 268 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 TOE1Q96GM8 510 aaKnown RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 PRR11Q96HE9 360 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 METTL2AQ96IZ6 378 aaKnown RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 SPACA7Q96KW9 195 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 PKP4Q99569 1192 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 RTKNQ9BST9 563 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 HAUS8Q9BT25 410 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 EFCAB11Q9BUY7 163 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 SLC25A23Q9BV35 468 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 ZDHHC5Q9C0B5 715 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 OSGEPL1Q9H4B0 414 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 EHD1Q9H4M9 534 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 ELOVL6Q9H5J4 265 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 MVB12BQ9H7P6 319 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 FZD3Q9NPG1 666 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 TRNAU1APQ9NX07 287 aaKnown RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 WSB2Q9NYS7 404 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 NOP53Q9NZM5 478 aaKnown RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 KLQ9UEF7 1012 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 EBF1Q9UH73 591 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 MOSPD1Q9UJG1 213 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 ZNF225Q9UK10 706 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 ZNF490Q9ULM2 529 aaPredicted RBP9.4□□□□□ -0.9
UBFD1-202ENST00000563366 SUFUQ9UMX1 484 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 CYP8B1Q9UNU6 501 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 BTRCQ9Y297 605 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 TIMM22Q9Y584 194 aa9.4□□□□□ -0.9
UBFD1-202ENST00000563366 A0A1B0GTL3 188 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 KRBA1A5PL33 1030 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 POM121BA6NF01 834 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 NDUFS2O75306 463 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 RSL1D1O76021 490 aaKnown RBP9.39□□□□□ -0.91
UBFD1-202ENST00000563366 KRT16P08779 473 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 ERGP11308 486 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 ACPPP15309 386 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 CASP2P42575 452 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 GNPDA1P46926 289 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 PHEXP78562 749 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 EMX2Q04743 252 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 CHIT1Q13231 466 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 E2F2Q14209 437 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 GAS6Q14393 721 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 KRT33BQ14525 404 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 HIST2H2ACQ16777 129 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-202ENST00000563366 UAP1L1Q3KQV9 507 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 C6orf163Q5TEZ5 329 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 TMEM198Q66K66 360 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 HIST2H2AA3Q6FI13 130 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 CAPRIN2Q6IMN6 1127 aaKnown RBP9.39□□□□□ -0.91
UBFD1-202ENST00000563366 GRHL2Q6ISB3 625 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 LCTLQ6UWM7 567 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 ENPP7Q6UWV6 458 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 C16orf89Q6UX73 402 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 WASH2PQ6VEQ5 465 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 FAM83HQ6ZRV2 1179 aaPredicted RBP9.39□□□□□ -0.91
UBFD1-202ENST00000563366 ABI3BPQ7Z7G0 1075 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 FNDC5Q8NAU1 212 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 TMEM145Q8NBT3 493 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 CADM4Q8NFZ8 388 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 PJA1Q8NG27 643 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 ZNF480Q8WV37 535 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 USP7Q93009 1102 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 CLDN23Q96B33 292 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 PYCR2Q96C36 320 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 C3orf30Q96M34 536 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 SGPP1Q9BX95 441 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 TBC1D10AQ9BXI6 508 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 BRINP2Q9C0B6 783 aa9.39□□□□□ -0.91
UBFD1-202ENST00000563366 ATG10Q9H0Y0 220 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms