RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SYTL2Q9HCH5 934 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ZFP14Q9HCL3 533 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ACOT13Q9NPJ3 140 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ENTPD7Q9NQZ7 604 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 PLCXD1Q9NUJ7 323 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 DDX28Q9NUL7 540 aaKnown RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 FAM49BQ9NUQ9 324 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 FBXL12Q9NXK8 326 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 OBP2AQ9NY56 170 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 IL20Q9NYY1 176 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 TNFRSF10DQ9UBN6 386 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 HMGXB4Q9UGU5 601 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 FBXL7Q9UJT9 491 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 CCNL1Q9UK58 526 aaPredicted RBP5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 USP22Q9UPT9 525 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 ITM2BQ9Y287 266 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 DERAQ9Y315 318 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 PCDHGB6Q9Y5F9 930 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 LYVE1Q9Y5Y7 322 aa5.82□□□□□ -1.48
SNRPA1-209ENST00000560307 PDCD11Q14690 1871 aaKnown RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 COL11A1P12107 1806 aaPredicted RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 IGKV6-21A0A0C4DH24 114 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 SLC12A8A0AV02 714 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 ASPDHA6ND91 283 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 A8MU76 341 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 E9PQ18 207 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CCRL2O00421 344 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 PIP5K1BO14986 540 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 STX7O15400 261 aaKnown RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 SLC7A4O43246 635 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 DPM1O60762 260 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 HUS1O60921 280 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 TMCC2O75069 709 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 RECQL5O94762 991 aaPredicted RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 PAPSS2O95340 614 aaPredicted RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 C1RP00736 705 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CST1P01037 141 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 MT-ND2P03891 347 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CYBBP04839 570 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 ITGB3P05106 788 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 RPLP0P05388 317 aaKnown RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 NCF1P14598 390 aaPredicted RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 NPR1P16066 1061 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 SPNP16150 400 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CD36P16671 472 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 PSMB9P28065 219 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CD6P30203 668 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 HTR7P34969 479 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 ADMP35318 185 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 SOX6P35712 828 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 AVPR1AP37288 418 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 HNF4AP41235 474 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 SLC1A2P43004 574 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 OR3A3P47888 321 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 ZFP36L2P47974 494 aaKnown RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 NRIP1P48552 1158 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CLK1P49759 484 aaKnown RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 SULT1E1P49888 294 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 MECP2P51608 486 aaKnown RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 SUOXP51687 545 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 POLR2JP52435 117 aaKnown RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CACNB3P54284 484 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 ERVK-8P63133 956 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CTAG1AP78358 180 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 OLR1P78380 273 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 BAMBIQ13145 260 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 TNK1Q13470 666 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CSHL1Q14406 222 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CAPRIN1Q14444 709 aaKnown RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 KCTD2Q14681 263 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 TESK1Q15569 626 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 TIMM50Q3ZCQ8 353 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 VPS26BQ4G0F5 336 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 PYCR3Q53H96 274 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 XKR7Q5GH72 579 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CEP78Q5JTW2 689 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 COLEC12Q5KU26 742 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 OTUD3Q5T2D3 398 aaPredicted RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 NDUFAF5Q5TEU4 345 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CES5AQ6NT32 575 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 NEK5Q6P3R8 708 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 SHQ1Q6PI26 577 aaKnown RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 OGFOD3Q6PK18 319 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 ZNF517Q6ZMY9 492 aaPredicted RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 RNF165Q6ZSG1 346 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 FAM214BQ7L5A3 538 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 SLC46A3Q7Z3Q1 461 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 RBM23Q86U06 439 aaKnown RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CCDC190Q86UF4 302 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 FAM83AQ86UY5 434 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 OSTM1Q86WC4 334 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 RALGPS2Q86X27 583 aaPredicted RBP5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CMIPQ8IY22 773 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 ELMOD2Q8IZ81 293 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CPA6Q8N4T0 437 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 PARP16Q8N5Y8 322 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 EFHBQ8N7U6 833 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 CCNYQ8ND76 341 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 PSD4Q8NDX1 1056 aa5.81□□□□□ -1.48
SNRPA1-209ENST00000560307 TOR1AIP2Q8NFQ8 470 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms