RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 NIPAL4Q0D2K0 466 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF460Q14592 562 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 FAM86B1Q8N7N1 296 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZCCHC10Q8TBK6 192 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ACTR6Q9GZN1 396 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 A8MUI8 341 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 EIF1AYO14602 144 aaKnown RBP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 FFAR2O15552 330 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ATE1O95260 518 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 PIRTP0C851 137 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 IRF2P14316 349 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 MSX1P28360 303 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 BBS12Q6ZW61 710 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 SMIM15Q7Z3B0 74 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 TMEM80Q96HE8 168 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ISCA1Q9BUE6 129 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 MRPS30Q9NP92 439 aaKnown RBP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 NCANO14594 1321 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 BTNL10A8MVZ5 291 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 TMEM150CB9EJG8 249 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 LCKP06239 509 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 SRPRAP08240 638 aaKnown RBP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 CHRM5P08912 532 aaPredicted RBP13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 CDH1P12830 882 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ECH1Q13011 328 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZBED5Q49AG3 693 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 SOCS4Q8WXH5 440 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 MTMR9Q96QG7 549 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 ATG5Q9H1Y0 275 aa13.55□□□□□ -0.24
CSPG4P12-202ENST00000559989 PAPSS1O43252 624 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 MYCLP1P12525 358 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 LTKP29376 864 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 PRKAR1BP31321 381 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 PSMD8P48556 350 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 CLCQ05315 142 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 GANABQ14697 944 aaKnown RBP13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLC1A5Q15758 541 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 IPPKQ9H8X2 491 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 NEDD8-MDP1E9PL57 170 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 BRINP1O60477 761 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 RECQL4O94761 1208 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 EIF2B1Q14232 305 aaKnown RBP13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 TMEM209Q96SK2 561 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 CMKLR1Q99788 373 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 ENAMQ9NRM1 1142 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 COQ9O75208 318 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 BMP8BP34820 402 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 ITPK1Q13572 414 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 TAS1R3Q7RTX0 852 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 BMP8AQ7Z5Y6 402 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 CLNKQ7Z7G1 428 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 MYOCQ99972 504 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 CCDC106Q9BWC9 280 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 ADH1AP07327 375 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 RAC2P15153 192 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 EEF1A2Q05639 463 aaKnown RBP13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 CERS6Q6ZMG9 384 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 C22orf15Q8WYQ4 148 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 MOAP1Q96BY2 351 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 DLGAP1O14490 977 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLITRK5O94991 958 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 CD3GP09693 182 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF136P52737 540 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 RPL26P61254 145 aaKnown RBP13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 ATXN7L3Q14CW9 347 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 ANKRD46Q86W74 232 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 NAXEQ8NCW5 288 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 ARL5BQ96KC2 179 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 CNTNAP3BQ96NU0 1288 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 RUVBL1Q9Y265 456 aaKnown RBP13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 SNX10Q9Y5X0 201 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 CLCA3PQ9Y6N3 262 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 TEX51A0A1B0GUA7 166 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 BMP6P22004 513 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 CCNFP41002 786 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 MMP14P50281 582 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 ZNF181Q2M3W8 571 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 OR52E4Q8NGH9 312 aa13.54□□□□□ -0.24
CSPG4P12-202ENST00000559989 M0R2N6 131 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 PIP5K1BO14986 540 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 RHOP08100 348 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 CCNOP22674 350 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 PEX2P28328 305 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 RPL35P42766 123 aaKnown RBP13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLC18A2Q05940 514 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 PGM5Q15124 567 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 C3P1Q6ZMU1 363 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 SLCO1B3Q9NPD5 702 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 ITSN1Q15811 1721 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 HLA-DPB1P04440 258 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 EIF1AXP47813 144 aaKnown RBP13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 MOGSQ13724 837 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 UGT8Q16880 541 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 PDZD9Q8IXQ8 264 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 TMEM203Q969S6 136 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 MGAT4CQ9UBM8 478 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 GRHPRQ9UBQ7 328 aa13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 INO80Q9ULG1 1556 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P12-202ENST00000559989 FAM230AA0A1W2PPH8 454 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms