RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SEPT5Q99719 369 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 HOXD1Q9GZZ0 328 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 SIAEQ9HAT2 523 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 GPRC5BQ9NZH0 403 aa11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 PRG3Q9Y2Y8 225 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-211ENST00000557658 TMEM189-UBE2V1I3L0A0 370 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 INPPL1O15357 1258 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 KCNK2O95069 426 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 PGLSO95336 258 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 PDYNP01213 254 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 DBTP11182 482 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 KDELR2P33947 212 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 HMGCLP35914 325 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 SLC14A1Q13336 389 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 KRR1Q13601 381 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 SF3B4Q15427 424 aaKnown RBP eCLIP11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 CARTPTQ16568 116 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 LRIT3Q3SXY7 679 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 TPRG1LQ5T0D9 272 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 FAM171A1Q5VUB5 890 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 FAHD1Q6P587 224 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 NCEH1Q6PIU2 408 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 FAM151BQ6UXP7 276 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 VTCN1Q7Z7D3 282 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 ENTHD1Q8IYW4 607 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 APH1BQ8WW43 257 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 SELENOMQ8WWX9 145 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 DNASE1L2Q92874 299 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 UBE2FQ969M7 185 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 YME1L1Q96TA2 773 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 BOCQ9BWV1 1114 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 RDH14Q9HBH5 336 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 THUMPD1Q9NXG2 353 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 SPATA7Q9P0W8 599 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 PPT2Q9UMR5 302 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 NUP214P35658 2090 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 MN1Q10571 1320 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 DYRK3O43781 588 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 PRAMEF1O95521 474 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 B3GALT4O96024 378 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 AKR1A1P14550 325 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 GADD45AP24522 165 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 TRPC1P48995 793 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 ITGA1P56199 1179 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 CAMK2GQ13555 558 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 ARHGEF7Q14155 803 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 TBCEQ15813 527 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 TIGD6Q17RP2 521 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 EIF3MQ7L2H7 374 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 ZZZ3Q8IYH5 903 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 KBTBD8Q8NFY9 601 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 MYDGFQ969H8 173 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 HSH2DQ96JZ2 352 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 LATS2Q9NRM7 1088 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 PCDHB9Q9Y5E1 797 aa11.49□□□□□ -0.57
VIPAS39-211ENST00000557658 A8MU76 341 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 FAM47E-STBD1D6RA91 191 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 M0R082 166 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 PSMD11O00231 422 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 CLIC1O00299 241 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 DUSP11O75319 330 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 C9P02748 559 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 ZDHHC11BP0C7U3 371 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 SDC1P18827 310 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 TACR1P25103 407 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 RCVRNP35243 200 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 PRKCDQ05655 676 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 DSC1Q08554 894 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 ABRQ12979 859 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 INO80DQ53TQ3 878 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 OR4F3Q6IEY1 312 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 CBLL1Q75N03 491 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 CLDN19Q8N6F1 224 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 CMTM7Q96FZ5 175 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 HRASLS5Q96KN8 279 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 SPATA17Q96L03 361 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 PTPN18Q99952 460 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 NXF2Q9GZY0 626 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 ELOVL6Q9H5J4 265 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 ASB8Q9H765 288 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 DNMT3LQ9UJW3 386 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 SNX6Q9UNH7 406 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 PRSS21Q9Y6M0 314 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 PIKFYVEQ9Y2I7 2098 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 OR6C75A6NL08 312 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 SYN3O14994 580 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 LRATO95237 230 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 KCNK5O95279 499 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 MED26O95402 600 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 PRAMEF12O95522 483 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 RPLP0P05388 317 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 ANXA5P08758 320 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 CTPS1P17812 591 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 ENGP17813 658 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 ITGALP20701 1170 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 KIR3DL1P43629 444 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 DUOXA1Q1HG43 343 aa11.48□□□□□ -0.57
VIPAS39-211ENST00000557658 PRSS36Q5K4E3 855 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms