RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 HSPA1LP34931 641 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 SOX6P35712 828 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 MATR3P43243 847 aaKnown RBP eCLIP1.59□□□□□ -2.154e-6■■■□□ 17.2
HIF1A-212ENST00000557538 ACADSBP45954 432 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 KHKP50053 298 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 CDH13P55290 713 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 STARD6P59095 220 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 COG7P83436 770 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 KLC1Q07866 573 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 COASYQ13057 564 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 PPP2R5CQ13362 524 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 MORF4L2Q15014 288 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 ASIC2Q16515 512 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 SYT14P1Q58G82 188 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 TMEM211Q6ICI0 200 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 FAM173BQ6P4H8 233 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 NHLRC1Q6VVB1 395 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 NCCRP1Q6ZVX7 275 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-212ENST00000557538 ZNF771Q7L3S4 317 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-212ENST00000557538 PPP1R42Q7Z4L9 355 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 KRT222Q8N1A0 295 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 TRIML2Q8N7C3 387 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 FAM76AQ8TAV0 307 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 GRHL3Q8TE85 626 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 FCAMRQ8WWV6 532 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 HSD17B8Q92506 261 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 CDKL2Q92772 493 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 P2RX5Q93086 422 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 IGSF21Q96ID5 467 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 UBXN6Q9BZV1 441 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 LRMDAQ9H2I8 198 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 TNMDQ9H2S6 317 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 CPVLQ9H3G5 476 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 EHD1Q9H4M9 534 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 PARVGQ9HBI0 331 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 Q9N2K0 584 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 PFDN4Q9NQP4 134 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 GLRX2Q9NS18 164 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 RHCGQ9UBD6 479 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 ZDHHC2Q9UIJ5 367 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 MRPL11Q9Y3B7 192 aaKnown RBP1.59□□□□□ -2.15
HIF1A-212ENST00000557538 SNX9Q9Y5X1 595 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 V9GYY5 206 aaPredicted RBP1.59□□□□□ -2.15
HIF1A-212ENST00000557538 MYO3BQ8WXR4 1341 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 CARMIL1Q5VZK9 1371 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 HEG1Q9ULI3 1381 aa1.59□□□□□ -2.15
HIF1A-212ENST00000557538 RPAP1Q9BWH6 1393 aaPredicted RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 FAM172BPA6NC97 362 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 CACNB4O00305 520 aaPredicted RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 CLIC2O15247 247 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ERLIN1O75477 346 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 PALMO75781 387 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ATP6AP2O75787 350 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 KCNK5O95279 499 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 GGPS1O95749 300 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 MT-ND3P03897 115 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 S100A6P06703 90 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 SERPINF2P08697 491 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 FRMD6-AS1P0C7T7 363 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ITGA2P17301 1181 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ITGB6P18564 788 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 HOXA11P31270 313 aaPredicted RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 FUT6P51993 359 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ARHGDIBP52566 201 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 MAZP56270 477 aaKnown RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 HERV-K104P61576 105 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 IL1RL1Q01638 556 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ACSM1Q08AH1 577 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 DMP1Q13316 513 aaPredicted RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 RCN1Q15293 331 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 SF3B4Q15427 424 aaKnown RBP eCLIP1.59□□□□□ -2.161e-6■■■■■ 55.4
HIF1A-212ENST00000557538 LRRC31Q6UY01 552 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.59□□□□□ -2.164e-15■■■■□ 26
HIF1A-212ENST00000557538 DET1Q7L5Y6 550 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 NUP54Q7Z3B4 507 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 NLRP14Q86W24 1093 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 METTL23Q86XA0 190 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ERO1BQ86YB8 467 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 PTOV1Q86YD1 416 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 ZNF611Q8N823 705 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 FAM133AQ8N9E0 248 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 SLC4A11Q8NBS3 891 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 NPEPL1Q8NDH3 523 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 DEPDC1BQ8WUY9 529 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 PIBF1Q8WXW3 757 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 IRGQQ8WZA9 623 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 CORO2AQ92828 525 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 SEMA4DQ92854 862 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 GLT8D2Q9H1C3 349 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 MMP28Q9H239 520 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 CNOT10Q9H9A5 744 aaKnown RBP1.59□□□□□ -2.16
HIF1A-212ENST00000557538 CRLF2Q9HC73 371 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 GSN-AS1Q9NRJ2 163 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 FGF21Q9NSA1 209 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 SEPT10Q9P0V9 454 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 B3GALT5Q9Y2C3 310 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 NACADO15069 1562 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 SOGA1O94964 1423 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 IGLV5-45A0A087WSX0 123 aa1.59□□□□□ -2.16
HIF1A-212ENST00000557538 A0A1B0GWJ7 208 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms