RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-210	ENST00000557431	TCTE1	Q5JU00	501 aa		13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	UNC5D	Q6UXZ4	953 aa		13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	BCORP1	Q8N888	145 aa		13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	ASZ1	Q8WWH4	475 aa		13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	SLC22A18	Q96BI1	424 aa		13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	CATSPERZ	Q9NTU4	200 aa		13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	COPG2	Q9UBF2	871 aa		13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	NXT1	Q9UKK6	140 aa	Known RBP	13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	AMFR	Q9UKV5	643 aa		13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	TTC7A	Q9ULT0	858 aa	Predicted RBP	13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	TCAF1	Q9Y4C2	921 aa		13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	EML6	Q6ZMW3	1958 aa		13.43	□□□□□ -0.26
SLIRP-210	ENST00000557431	NSG1	A0A0A6YYJ2	146 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	TRGV8	A0A0C4DH27	118 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	PSMD3	O43242	534 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	C1orf105	O95561	183 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	UQCRH	P07919	91 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	PRR35	P0CG20	571 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	OCA2	Q04671	838 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	TSTA3	Q13630	321 aa	Predicted RBP	13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	HKDC1	Q2TB90	917 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	PTRHD1	Q6GMV3	140 aa	Known RBP	13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	SUSD1	Q6UWL2	747 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	GFRAL	Q6UXV0	394 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	RNF44	Q7L0R7	432 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	PEX26	Q7Z412	305 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	LINC00523	Q86TU6	105 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	SLC34A3	Q8N130	599 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	OR2L3	Q8NG85	312 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	OR2A1	Q8NGT9	310 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	NR4A3	Q92570	626 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	CABS1	Q96KC9	395 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	FAM169A	Q9Y6X4	670 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	CSMD2	Q7Z408	3487 aa		13.42	□□□□□ -0.26
SLIRP-210	ENST00000557431	APC	P25054	2843 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	PRMT5	O14744	637 aa	Predicted RBP	13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	SLCO2B1	O94956	709 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	RPN2	P04844	631 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	ITGAM	P11215	1152 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	ADRA1D	P25100	572 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	ELAVL4	P26378	380 aa	Known RBP	13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	MST1	P26927	711 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	SOX11	P35716	441 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	EIF3B	P55884	814 aa	Known RBP	13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	MAT1A	Q00266	395 aa	Known RBP	13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	ACVR1	Q04771	509 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	SNX1	Q13596	522 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	TMED2	Q15363	201 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	FAM214A	Q32MH5	1076 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	CTSL3P	Q5NE16	218 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	ATG9B	Q674R7	924 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	CES3	Q6UWW8	571 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	KBTBD2	Q8IY47	623 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	C1orf54	Q8WWF1	131 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	NACC2	Q96BF6	587 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	CCDC120	Q96HB5	630 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	TTC1	Q99614	292 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	TRIM56	Q9BRZ2	755 aa	Known RBP	13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	DPH7	Q9BTV6	452 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	CHRAC1	Q9NRG0	131 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	ABCF3	Q9NUQ8	709 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	GALP	Q9UBC7	116 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	TRPC4	Q9UBN4	977 aa		13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	RUVBL1	Q9Y265	456 aa	Known RBP	13.41	□□□□□ -0.26
SLIRP-210	ENST00000557431	IGHV3-20	A0A0C4DH32	117 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431		A0A1B0GUH1	482 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	IDS	B3KWA1	339 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	GOLGA8K	D6RF30	607 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431		E7EVH7	732 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431		H0YGG7	62 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	GOLGA8T	H3BQL2	631 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	PCDH17	O14917	1159 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	ZNHIT1	O43257	154 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	NIPSNAP2	O75323	286 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	UNC5C	O95185	931 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	WDPCP	O95876	746 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	ZSCAN5DP	P0CG00	497 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	ERVK-10	P10266	1014 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	NMBR	P28336	390 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	CARS	P49589	748 aa	Known RBP	13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	TNFSF10	P50591	281 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	EMP2	P54851	167 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	SESN2	P58004	480 aa	Predicted RBP	13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	ARF3	P61204	181 aa	Predicted RBP	13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	FBXO42	Q6P3S6	717 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	NDUFAF7	Q7L592	441 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	KIAA1328	Q86T90	577 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	OTUD6B	Q8N6M0	293 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	PPFIBP2	Q8ND30	876 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	ZUFSP	Q96AP4	578 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	RAD51AP1	Q96B01	352 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	LMF1	Q96S06	567 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	DESI2	Q9BSY9	194 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	TSSK1B	Q9BXA7	367 aa		13.4	□□□□□ -0.26
SLIRP-210	ENST00000557431	P2RY12	Q9H244	342 aa		13.4	□□□□□ -0.26

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