RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-231ENST00000557336 SOX17Q9H6I2 414 aaPredicted RBP10.67□□□□□ -0.7
HNRNPC-231ENST00000557336 CATSPERZQ9NTU4 200 aa10.67□□□□□ -0.7
HNRNPC-231ENST00000557336 IRAK4Q9NWZ3 460 aa10.67□□□□□ -0.7
HNRNPC-231ENST00000557336 GALPQ9UBC7 116 aa10.67□□□□□ -0.7
HNRNPC-231ENST00000557336 CDC23Q9UJX2 597 aa10.67□□□□□ -0.7
HNRNPC-231ENST00000557336 NOVA2Q9UNW9 492 aaKnown RBP10.67□□□□□ -0.7
HNRNPC-231ENST00000557336 ZNF148Q9UQR1 794 aa10.67□□□□□ -0.7
HNRNPC-231ENST00000557336 SLC5A6Q9Y289 635 aa10.67□□□□□ -0.7
HNRNPC-231ENST00000557336 CSMD2Q7Z408 3487 aa10.67□□□□□ -0.7
HNRNPC-231ENST00000557336 PDZD2O15018 2839 aa10.67□□□□□ -0.7
HNRNPC-231ENST00000557336 IGKV1-8A0A0C4DH67 115 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 TARM1B6A8C7 271 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 PTMAP06454 111 aaKnown RBP10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 APOA4P06727 396 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 ITGA3P26006 1051 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 BDKRB1P46663 353 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 GLRBP48167 497 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 EFNA3P52797 238 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 VSX2P58304 361 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 PRAMEP78395 509 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 GRM7Q14831 915 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 ZC3H12BQ5HYM0 836 aaKnown RBP10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 PCID2Q5JVF3 399 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 YOD1Q5VVQ6 348 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 CES3Q6UWW8 571 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 NLRP9Q7RTR0 991 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 SHISA5Q8N114 240 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 ARHGEF39Q8N4T4 335 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 CATSPER1Q8NEC5 780 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 OR2L3Q8NG85 312 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 PPP4R1Q8TF05 950 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 PSMF1Q92530 271 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 C10orf90Q96M02 699 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 TTC1Q99614 292 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 MIPEPQ99797 713 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 SELENOSQ9BQE4 189 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 FRMD8P1Q9BZ68 369 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 TTC7AQ9ULT0 858 aaPredicted RBP10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 MAU2Q9Y6X3 613 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 AKAP9Q99996 3911 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 NUP210LQ5VU65 1888 aa10.66□□□□□ -0.7
HNRNPC-231ENST00000557336 CROCCQ5TZA2 2017 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 IGLV3-12A0A075B6K2 115 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 TCRBV7S3A2A0A539 114 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 HYKKA2RU49 373 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 OR2A25A4D2G3 310 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 E7EVH7 732 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 KDM1AO60341 852 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 SRPX2O60687 465 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 MATN4O95460 622 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 ERGP11308 486 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 RPS3P23396 243 aaKnown RBP eCLIP10.65□□□□□ -0.72e-10■■□□□ 12.3
HNRNPC-231ENST00000557336 TSFMP43897 325 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 TTPAP49638 278 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 SESN2P58004 480 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 KLC1Q07866 573 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 PRTGQ2VWP7 1150 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 TCTE1Q5JU00 501 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 ATG9BQ674R7 924 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 PTRHD1Q6GMV3 140 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 RNF44Q7L0R7 432 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 RNF10Q8N5U6 811 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 ST6GALNAC3Q8NDV1 305 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 DNAJB14Q8TBM8 379 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 STT3BQ8TCJ2 826 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 GRHL3Q8TE85 626 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 TM9SF4Q92544 642 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 LPGAT1Q92604 370 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 RAD51AP1Q96B01 352 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 C8orf44Q96CB5 159 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 CDK15Q96Q40 435 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 KIFC1Q9BW19 673 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 LHPPQ9H008 270 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 EIF2B3Q9NR50 452 aaKnown RBP10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 SLC39A10Q9ULF5 831 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 ADGRG4Q8IZF6 3080 aa10.65□□□□□ -0.7
HNRNPC-231ENST00000557336 A0A0J9YVX5 310 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 GOLGA8KD6RF30 607 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 GOLGA8TH3BQL2 631 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 KLHL41O60662 606 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 NIPSNAP2O75323 286 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 FKBP9O95302 570 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 GAS8O95995 478 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 RPN2P04844 631 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 ZGLP1P0C6A0 271 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 CCNG2Q16589 344 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 TYSND1Q2T9J0 566 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 FAM214AQ32MH5 1076 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 TUBB8Q3ZCM7 444 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 VWA2Q5GFL6 755 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 AARS2Q5JTZ9 985 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 MEI1Q5TIA1 1274 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 AGAP7PQ5VUJ5 663 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 ZNF324BQ6AW86 544 aaPredicted RBP10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 CNSTQ6PJW8 725 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 PPHLN1Q8NEY8 458 aaKnown RBP10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 FAR1Q8WVX9 515 aa10.64□□□□□ -0.71
HNRNPC-231ENST00000557336 MFSD3Q96ES6 412 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms